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cn_combo_scaffold_242_35

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: comp(30966..31589)

Top 3 Functional Annotations

Value Algorithm Source
tetracycline repressor n=1 Tax=Arthrobacter sp. PAO19 RepID=UPI0003B6F9F7 similarity UNIREF
DB: UNIREF100
  • Identity: 39.3
  • Coverage: 211.0
  • Bit_score: 123
  • Evalue 2.70e-25
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 36.8
  • Coverage: 209.0
  • Bit_score: 123
  • Evalue 5.80e-26
TetR family transcriptional regulator {ECO:0000313|EMBL:AKD98871.1}; TaxID=1833 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus erythropolis (Art similarity UNIPROT
DB: UniProtKB
  • Identity: 36.8
  • Coverage: 209.0
  • Bit_score: 123
  • Evalue 2.90e-25

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Taxonomy

Rhodococcus erythropolis → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 624
ATGCCCCGTCCCTCGCAGAACATCCTCTCGACGAGCGCGATCGCCCGCGCGGCGCTCGCGCTCGTCGAGGAGAAGGGCGACTTCACGATCCCCGGTATCGCGCGGGCACTGAAGGTGAACCCCTCCTCGCTCTACCACCACCTGCCGGGCGGACGGCTGGCGATCATCCATCGGATGCGGGAGGAGCTGTACGCGCGCATCGACGTGCAGGCGCTGCGGGACGGCACGCGGTCTCCGGAGGAGCGCCTCCGCGCCTGGATGGGCGACGTGCGCGCGGCCCTCGCGACCGCCCCCGGGGTCGTGATCGTCCTGGTCTCCTCGCCCGTGCAGGACGCCCTCACCCTGGCGATCTACGAGGCGTTGTTCGAGATCCTCCGTGACTTCGGCACCCCGGTGGACCGCCGAATGGCCTTCGCCGCCATGATCGACGCGGTGGTCCTCGGTTCGGCGGTGGATGCAGGATCGCCGGCGCCGCTGTGGCAGGCAGACCCGGCGGAGAACCCCGAGCTGTTCGCCGCGGCGGCCCGCGAGGACGACGCCTCGCGGGCGTCTGCGGGGTTCGCGCTGGCCGTCGACGTGACCATCGCTGCCGTGCAAGCGGCCGCTGTGACGACATCGCGGTGA
PROTEIN sequence
Length: 208
MPRPSQNILSTSAIARAALALVEEKGDFTIPGIARALKVNPSSLYHHLPGGRLAIIHRMREELYARIDVQALRDGTRSPEERLRAWMGDVRAALATAPGVVIVLVSSPVQDALTLAIYEALFEILRDFGTPVDRRMAFAAMIDAVVLGSAVDAGSPAPLWQADPAENPELFAAAAREDDASRASAGFALAVDVTIAAVQAAAVTTSR*