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cn_combo_scaffold_242_85

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: comp(84361..88131)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
Rhamnogalacturonan exolyase YesX {ECO:0000313|EMBL:KJL19215.1}; EC=4.2.2.- {ECO:0000313|EMBL:KJL19215.1};; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacter similarity UNIPROT
DB: UniProtKB
  • Identity: 50.5
  • Coverage: 999.99
  • Bit_score: 1200
  • Evalue 0.0
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI000316C91D similarity UNIREF
DB: UNIREF100
  • Identity: 72.9
  • Coverage: 999.99
  • Bit_score: 1883
  • Evalue 0.0
fibronectin type 3 domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 50.6
  • Coverage: 999.99
  • Bit_score: 988
  • Evalue 2.20e-285

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Taxonomy

Microbacterium foliorum → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3771
ATGAGGTTCCGCACCGCGATCGCCGCCCTGGCGGGAGGCGCGATCGTCGTCTCCGGCGGGATCGTGACGGCTCCGGCATCCGCGAACGAGGAGATCGATCTGCGCTTCGACTTCGGCGGACCCGCTTCCCCTGTCGCCGAGGGGTGGACCGGCGTGCACCCCGGATCGGCCTACAGCGCAGAGCTCGGCTACGGATTCACCGTCGCACCGGGGGCGTTCCGCGACCGGGGCGGCGACGACCTCGTCGCACGCGACTTCACGATCGCCGGCAGCTCGACCTTCGCCGTCGACGTCCCCAACGGCACCTACGAGGTCACGACGTGGGCAGGCGACCTCATCGCCGGCAACCGCACGACGTTCGACATCGAGGGCACCGCGTTCTCGGGCCCGCGGACCTCCAGCGGTGCCGTGCACGAGGAGTTCTTCCCCGAGATCGTCGTCGCCGACGGACAGCTCACCATCTCGGCATCCGGCGACGGACGCATCAACGGCATCGTCGTGCAGACGCCCCTGCCCGCACCGCTCGCGCTGGCCACCTCCGTGAACGCCGACGTCCCCGTCGTCGCGCTCGGGTGGGAGCCGGTCGCCGGCGCCACGGGCTACACGATCTCCCGCGCCGCCCCCGGCGGAGACCTGGCCGAGATCGCCACCGTGGCGGCGCCCTTCGACGCGGCCACTCCCCCGACGTACGTCGACAGCGACGTCGAGCTCGGCGAGAGCTACGACTACGCCGTGGCGACGGTGAAGGGCGAACGGACCTCCCGCACCGGCGAGCGCGTCACGGCCTCGGTCACGGACGCCTCGGTCGCCCCGCCCGCGCAGCCCTCCGGGCTCGTGACGACGTCGATCGAGCGAAACAGCGTGACCATCGCATGGGACGCCGTCGAGGGCGCCGCTCTCTACCGGGTGTTCCGTTCCACGCGCGAGGATCTCCCCTTCACCGAGATCGCACGCGTCGGCGAGCCGACCTACACCGACACGGATGTCCTCACCACGCGCCCGTACCTCTACCGCGTGGTCGCGGTGAACGCCGGCGGTGCGTCGGAGGAGTCCGCGGTGCACGCGACGGATGCCGCCACCACCCTGGTGCGGAACGTCGAGTACCTCGACCGCTCCCCGGTCGCGGTGACGACGGATGCCGGGGTCTACCTGGGCTGGCGCCTCCTCGGCCTCGACGACCGCGACCTCGGGTTCACCGTCTACCGCGACGGCGTGAAGATCACCGACGCCCCGATCACCGAGACCACCAACCTCGTCGACCCCGACGGCACGGCCGATTCGACTTACCTCGTCACGGCGCAGATCGGCGACCGCGAGGTCTCGGTGACCGACGAGTTCGGGGTGTGGGCATCCGGGTACCTCGACATCGCGCTGGACACCCCGGCGCCGCAGACGATGCCCGACGGCAGCACCGCGACCTACGCCCCCGGCGACGGCACGGTGGCCGATCTCGACGGCGACGGGCAGTACGAGCTGATCTTCCTCTGGAACCCCTCCAATGCGAAGGACAACTCCCAGTCCGGCTACACCGGCAACGTCCACATCGAAGCGGTGCGTCTCGACGGCACGAGCCTGTGGCGGATCGACCTCGGGCGGAACATCCGAGCCGGCGCGCACTACACCCAGCTCGAGGCGTTCGACCTCGACAGCGACGGGCGCGCCGAGATCGCGGTGAAGACCGCCGACGGCACGATCGACGGCGAGGGCACCGTCATCGGCGACCCCGACGCGGATCACCGGAACTCCGGCGGCTACATTCTCACCGGCCCCGAGTACCTCACCGTCTTCGACGGCGAGACCGGCGCCGCGATCGACACCGTCGACTACCTGCCCGGCCGAGGCAACGTCGCCGCGTGGGGTGACGGATACGGCAACCGCGTCGACCGGTTCCTCGGCGGCGTCGCCTACCTCGACGGCGAGAACCCGTCGCTGGTGATGAGCCGCGGCTACTACACCCGCAGCGTCATCGTCGCGTGGGACCTCGTCGACGGACAGCTCGTCGAGCGCTGGACGTTCGACTCCGACGAGGCCGGCGACACATACGAGGGGCAGGGCAACCACCAGTTCACCGTCGCCGACGTCGACCGCGACGGTCTAGACGAGATCGTCTTCGGCGCCCTGACGATCGATGACGACGGCACGCCGCTGTACAACTCGCGTCTGTTCCACGGCGACGCGCAGCACGTCGGCGACTTCGTCACCGACCGCCCGGGCCTGGAGGTCTACAGCGTCTTCGAGAGCCCGAGCGGCAACGGCGGCATCATCGCCGCGATGCGCGACGCCGAGACCGGCGAGATCCTCTGGGCAAACGAGGGCAGCCGCGACACCGGCCGCGGCACCGCCGCCGACATCGACCCGACCTCTCCCGGTGCGGAGGCGTGGAACATCGGCGGGGACTTCGCGTGGAACTCCCGCGTAGGTACCCTCAACGCCGCCGACGGCGCGGTGCTGTCGAACGACATCCCCGCGGCGAACTTCGTCACCTGGTGGGACGGCGACCTCACACGGGAGATCACCGACCACGACTACGACACCGCCATCTCTGCGGGGGTCCCGACGATCTCGAAATGGGACCCGGCGGCGCAGGAGGAGGTCGAGATCGCCCGCTTCGAGGGGACGCTGACGAACAACACCACCAAGGGCAATCCCGTCATCCAGGCCGACCTCTTCGGCGACTGGCGCGAGGAGGTCGCGGTGCGGCTCGCCGATGGCAGCGGCATCCGCATCCACACGACGACGGATGTCGCGGACACGCGGATCCCGACCCTCATGCACGACTCGCAGTATCGGCTGGCTGTGGCGAACCAGAACTCCGCGTACAACCAGCCGCCGAACCCGTCGTTCTTCCTCGGCGCCGGGATGGAGGAGCCGCCCGCGGCCGCCATCTCGTACGTCGGTGCGCCCGCGGCGGACGAGTCCGCGCCGGTGATCGACGGGATGCCGTCGGGCATCGTCTCAGTCGACGACCCGCTCGCCCTGGCGGTGACCGCAGACGACCCGGAGAGCGGTGTGCGGACGCTCGCGGTGATGGTCGATGGGGTCGAGGTGCCGGCATCCGGCGAGGTGATCCTGTCCGAGCTCGGACTCGACGGCGACGGGCGCGAGGTCGAGGTGATCGCCACTGCCGTGAACAACGCCGGGCTCGAGACCGTCGAGACCTCGACCGTGCTGCTCGTGCCGGGCGACGAGTTCTCCGCAGCTCCCGGACGCGGCACCCTGTCGAACACGAGCGGGTGGGACTACGGCCTGCACGACGGGAACTACGACGTCGTCATGAACCTGTGGTGGGGCGTGCCGGGGACGGTGTTCCGCCTCTTCGAGAACGGCGAGCTGATCGAGACCCGCGTGCTCGAGCCGACCGCGGGGATGTCGCAGACGACAGGGCTCCGCATCGAGAGCAAGCCGAACGGCCGCTACGTGTACACCGCCGAGCTCGTCAACGCGCAGGGTGTGACGGAGACGACGTCGACGACGGTCGTCGTGAACGCCGCAGCCCCGGGGAAGCCGGTCGTGTCCCACGACAACGGGGATCGGGACGGCGACTTCACGGTGACGGCGAACCTCTGGTGGGGCACCAACGCCGACGCGTACGACCTCCTGCTCGACGGCGAGGTCGTCGACTCCGGCGAGCTCGCCGCCGCGACACCCTCCGCCCAGCGGGTACGGGTGGAGCTCGAGGACGTCGCGGCGGGCACCCATGAGCTCGTGGCGGTGTTCCGCAACGCCGCCGGGGAGACGGCATCCGCTCCGGTGACGGTGACCGTACGATAG
PROTEIN sequence
Length: 1257
MRFRTAIAALAGGAIVVSGGIVTAPASANEEIDLRFDFGGPASPVAEGWTGVHPGSAYSAELGYGFTVAPGAFRDRGGDDLVARDFTIAGSSTFAVDVPNGTYEVTTWAGDLIAGNRTTFDIEGTAFSGPRTSSGAVHEEFFPEIVVADGQLTISASGDGRINGIVVQTPLPAPLALATSVNADVPVVALGWEPVAGATGYTISRAAPGGDLAEIATVAAPFDAATPPTYVDSDVELGESYDYAVATVKGERTSRTGERVTASVTDASVAPPAQPSGLVTTSIERNSVTIAWDAVEGAALYRVFRSTREDLPFTEIARVGEPTYTDTDVLTTRPYLYRVVAVNAGGASEESAVHATDAATTLVRNVEYLDRSPVAVTTDAGVYLGWRLLGLDDRDLGFTVYRDGVKITDAPITETTNLVDPDGTADSTYLVTAQIGDREVSVTDEFGVWASGYLDIALDTPAPQTMPDGSTATYAPGDGTVADLDGDGQYELIFLWNPSNAKDNSQSGYTGNVHIEAVRLDGTSLWRIDLGRNIRAGAHYTQLEAFDLDSDGRAEIAVKTADGTIDGEGTVIGDPDADHRNSGGYILTGPEYLTVFDGETGAAIDTVDYLPGRGNVAAWGDGYGNRVDRFLGGVAYLDGENPSLVMSRGYYTRSVIVAWDLVDGQLVERWTFDSDEAGDTYEGQGNHQFTVADVDRDGLDEIVFGALTIDDDGTPLYNSRLFHGDAQHVGDFVTDRPGLEVYSVFESPSGNGGIIAAMRDAETGEILWANEGSRDTGRGTAADIDPTSPGAEAWNIGGDFAWNSRVGTLNAADGAVLSNDIPAANFVTWWDGDLTREITDHDYDTAISAGVPTISKWDPAAQEEVEIARFEGTLTNNTTKGNPVIQADLFGDWREEVAVRLADGSGIRIHTTTDVADTRIPTLMHDSQYRLAVANQNSAYNQPPNPSFFLGAGMEEPPAAAISYVGAPAADESAPVIDGMPSGIVSVDDPLALAVTADDPESGVRTLAVMVDGVEVPASGEVILSELGLDGDGREVEVIATAVNNAGLETVETSTVLLVPGDEFSAAPGRGTLSNTSGWDYGLHDGNYDVVMNLWWGVPGTVFRLFENGELIETRVLEPTAGMSQTTGLRIESKPNGRYVYTAELVNAQGVTETTSTTVVVNAAAPGKPVVSHDNGDRDGDFTVTANLWWGTNADAYDLLLDGEVVDSGELAAATPSAQRVRVELEDVAAGTHELVAVFRNAAGETASAPVTVTVR*