ggKbase home page

cn_combo_scaffold_403_9

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: 9370..10680

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A9T9_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 84.8
  • Coverage: 446.0
  • Bit_score: 720
  • Evalue 1.00e-204
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral similarity UNIPROT
DB: UniProtKB
  • Identity: 84.5
  • Coverage: 446.0
  • Bit_score: 718
  • Evalue 4.30e-204
DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) similarity KEGG
DB: KEGG
  • Identity: 84.3
  • Coverage: 439.0
  • Bit_score: 702
  • Evalue 8.40e-200

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium sp. oral taxon 186 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1311
GTGACCTCAGGGACGAAGACCACAGCGGCCCCGACCGCAGCGACGGACACGGAGCTGGACGAGGCCGAGAAGGTGACGACGACCCCGAAGGCGTCGCCCAAGAAGCGTGCCGCGTCCACGGCGACCAAGAAGAAGGCGGCGCCGAAGAAGGCGGCCGCGGCGGAAGAGCCGGAAGAGGACGACGAGGTCGACGATGACGTCGAGATCGACGCCGACGACGACAGCTCCGACGACGACGCCTCGGACGACACTGCGGCGAAGAAGAAGTCCGACGGTGACGACGACGACGAGAGCAACACCAAGCCCGCCGCCGCCGAACCTCTGCCCACCGGGGCCATCGTCATCTCGACCAGCGATGAGGACGACATCCCCGTCTACTCGACGCAGATCACCGGCGCCACCGCGGACCCCGTCAAGGACTATCTGAAGCAGATCGGCAAGGTGCCGCTGCTCAACGCGGCCGAAGAGGTCGAGCTTGCGATGCGCATCGAGGCGGGCCTGTTCGCCGAGGAGAAGCTGTCGCAGATGTCGGCGGCCGAGAAGTCGTCGCAGCTCGGACTCGACCTGCAGTGGGTGGCCCGTGACGGCCAGCGCGCCAAGAGCCACCTGCTCGGCGCGAACCTCCGCTTGGTCGTGTCGCTCGCCAAGCGCTACACCGGCCGTGGCATGCAGTTCCTCGATCTGATCCAGGAAGGCAACCTGGGCCTCATCCGTGCCGTCGAGAAGTTCGACTACACCAAGGGGTTCAAGTTCTCGACCTACGCCACGTGGTGGATCCGGCAGGCGATCACCCGGGCGATGGCGGACCAGGCGCGGACGATCCGCATCCCCGTCCACATGGTCGAGGTCATCAACAAGCTGGCCCGCGTCCAGCGCCAGATGCTCCAGGACCTGGGTCGTGAGCCCACCCCGGAAGAACTCTCCCGCGAGCTGGACATGACCCCCGAGAAGGTCATCGAGGTGCAGAAGTACGGCCGTGAGCCGATCTCGCTGCACACCCCCCTCGGCGAGGACGGCGACAGCGAGTTCGGTGACCTCATCGAGGACACCGAGGCGGTGGTCCCGGCCGATGCCGTCGGATTCACGATGCTCCAGCGCCAGCTCGAGTCGCTGCTCGACTCCCTGTCGGAGCGCGAGGCGGGCGTGATCCGCATGCGCTTCGGGCTCGGAGACGGTCAGCCCAAAACCCTCGACCAGATCGGCGACACGTTCGGGGTCACCCGCGAGCGGATCCGCCAGATCGAGTCGAAGACCATGGCCAAGCTCCGGCATCCGTCACGGTCGCAGTCGTTGCGGGATTACCTCGAGTGA
PROTEIN sequence
Length: 437
VTSGTKTTAAPTAATDTELDEAEKVTTTPKASPKKRAASTATKKKAAPKKAAAAEEPEEDDEVDDDVEIDADDDSSDDDASDDTAAKKKSDGDDDDESNTKPAAAEPLPTGAIVISTSDEDDIPVYSTQITGATADPVKDYLKQIGKVPLLNAAEEVELAMRIEAGLFAEEKLSQMSAAEKSSQLGLDLQWVARDGQRAKSHLLGANLRLVVSLAKRYTGRGMQFLDLIQEGNLGLIRAVEKFDYTKGFKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLARVQRQMLQDLGREPTPEELSRELDMTPEKVIEVQKYGREPISLHTPLGEDGDSEFGDLIEDTEAVVPADAVGFTMLQRQLESLLDSLSEREAGVIRMRFGLGDGQPKTLDQIGDTFGVTRERIRQIESKTMAKLRHPSRSQSLRDYLE*