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cn_combo_scaffold_403_63

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: comp(70726..70980)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-R similarity UNIPROT
DB: UniProtKB
  • Identity: 94.0
  • Coverage: 84.0
  • Bit_score: 167
  • Evalue 9.30e-39
DNA-directed RNA polymerase subunit omega n=1 Tax=Microbacterium yannicii RepID=UPI0002F5285A similarity UNIREF
DB: UNIREF100
  • Identity: 95.2
  • Coverage: 84.0
  • Bit_score: 166
  • Evalue 8.70e-39
rpoZ; DNA-directed RNA polymerase, subunit K/omega similarity KEGG
DB: KEGG
  • Identity: 91.7
  • Coverage: 84.0
  • Bit_score: 160
  • Evalue 2.30e-37

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Taxonomy

Microbacterium mangrovi → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 255
ATGGCCGGAACGAACCAGGGCATCATCGAGCCCCCCATCGACAGCCTTCTCGAGAAGGTCGACTCGAAGTACCAGCTGGTGATCTACGCGGCCAAGCGGGCGCGCCAGATCAACGACTACTACTCCGACCTGCACGAGGGCAACCTCTTCGACAACGTGGGTCCGCTGGTCGACTCCACCGTCGAAGACAAGCCGCTCACGATCGCGATGCACGAGATCCACGAGGACAAGCTGCGTCTGCGTCACGCGGAGTAA
PROTEIN sequence
Length: 85
MAGTNQGIIEPPIDSLLEKVDSKYQLVIYAAKRARQINDYYSDLHEGNLFDNVGPLVDSTVEDKPLTIAMHEIHEDKLRLRHAE*