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cn_combo_scaffold_408_15

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: comp(9394..10410)

Top 3 Functional Annotations

Value Algorithm Source
LacI family transcriptional regulator n=1 Tax=Microbacterium sp. 292MF RepID=UPI000375F7D1 similarity UNIREF
DB: UNIREF100
  • Identity: 80.5
  • Coverage: 338.0
  • Bit_score: 532
  • Evalue 2.40e-148
HTH-type transcriptional regulator CelR {ECO:0000313|EMBL:CDK01327.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C similarity UNIPROT
DB: UniProtKB
  • Identity: 78.0
  • Coverage: 332.0
  • Bit_score: 513
  • Evalue 2.80e-142
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 64.2
  • Coverage: 338.0
  • Bit_score: 423
  • Evalue 5.80e-116

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Taxonomy

Microbacterium sp. C448 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1017
ATGAGCGCAGACACCGTTCGAGGTTCTGTCACGATCGAAGAGGTCGCCGCGGCGGCCGGGGTCTCCCGATCGACGGTGTCGCGCGTGGTGAACGGCTCGACGGCCGTGAGCCCGGAAGCGCTCGACGCGGTCAACCGTGCGATCGCCGATCTGAACTACGTGCCGAACCGTGCGGCTCGTTCGCTCGCGAGCCGTCAGACGCACGCCATCGCGCTGATCGTGCCCGAAGACACGACGCGGTTCTTCGGCGACCCGTTCTTCGCCGCGATCGTGTCGGGCATCAACGCCCGACTCAGTCGTTCGGACTACGTGCTGAACCTCTTCATCGCCAATGACGACCCCGGCGACAAGACCACGAGCTACGTCCGCAGTGGTGCGGTCGACGGCGCGATCGTCGTGTCGCACCACACCAGTGACACGTTCATCGACCGGATCGCCGCCGTCGTCCCGGTCGTCTACGGTGGTCGCCCCGTGCGCGAGCGCGAGCGCGACTACTACGTCGACGTCGACAACGTCCGGGGCGGACGGGATGCCGTGGCGCACCTGATCGCCCACGGGCGGCGCCGCATCGCGACCATCACCGGCCCGCTGAACATGCCCGCCGGCGTCGACCGCCTCCGCGGCTACCGCCAGGCGCTGCAGGAAGCCGGCCTCCTGGAAGGACCGATCGAGGACGGCCGGTTCACCTCCGACGGCGGTACCGCGGCGATGCGTCGCATGCTCGAGCGCGGCGGCGACCTCCCCGATGCGATCTTCATCGCCAGCGACCTGATGGCGCGCGGCGCGATGAGCGTGCTCACCGCCGCCGGCATCCGTGTTCCCGAGGACATCTCGATCGTCGGCTTCGACGATTCACCGGTCGCCACCTCGGTGACACCGGCGCTGACGACGATGCGTCAGCCCTCGTTCGCGCAGGGGGAGCGGATGGCCTCGATCCTCCTCGACCTCCTCGCCGGACGCGAGGCGCCGCACGTGACGATCCTCGAGACCGAGCTCATCCCCCGCGACTCGGTCTGA
PROTEIN sequence
Length: 339
MSADTVRGSVTIEEVAAAAGVSRSTVSRVVNGSTAVSPEALDAVNRAIADLNYVPNRAARSLASRQTHAIALIVPEDTTRFFGDPFFAAIVSGINARLSRSDYVLNLFIANDDPGDKTTSYVRSGAVDGAIVVSHHTSDTFIDRIAAVVPVVYGGRPVRERERDYYVDVDNVRGGRDAVAHLIAHGRRRIATITGPLNMPAGVDRLRGYRQALQEAGLLEGPIEDGRFTSDGGTAAMRRMLERGGDLPDAIFIASDLMARGAMSVLTAAGIRVPEDISIVGFDDSPVATSVTPALTTMRQPSFAQGERMASILLDLLAGREAPHVTILETELIPRDSV*