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cn_combo_scaffold_982_36

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: 33081..33665

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000380EE03 similarity UNIREF
DB: UNIREF100
  • Identity: 73.8
  • Coverage: 183.0
  • Bit_score: 262
  • Evalue 2.70e-67
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.3
  • Coverage: 189.0
  • Bit_score: 264
  • Evalue 1.30e-67
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 53.2
  • Coverage: 186.0
  • Bit_score: 183
  • Evalue 7.60e-44

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Taxonomy

Microbacterium sp. C448 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 585
ATGAGCAGCGCAGTGTTGAGGGAAGGCACCCCCGTGGATGAGATCGAGGAGCAGGAACTGCATGAGCGGTTCCGTCAGGGCGACGAGAGAGCGCTCGAAGCCATCTACCGCAGGTGGTCGCCGATCGTCTTCACCCTGGCCCTGCGGTCCCTGGGGGATCGGGGCGATGCGGAGGACGTGACGCAGAAGACGTTCGTCTCCGCGTGGACGTCGCGTGCGTCGTACGACCCGTCGAAGGCGAAACTCTCCACCTGGCTGGTGGCGATCGCGAAGCGACGCATCGCGGACATGCACGAGGCGAGGGCCAGGGTCCGCGCCCTTCAGGAGCAGTTGCAGCGGACGGCGCACCCGGATGACCTGGTCGGACACGAGGTCGACCTCGGAGATTCGCTCCTCCTCGCCGATGAATTGCAGCGGCTCGAACCCGACGCGCAACGTGTGGTGCGTCTCGCCTTCTACGATGATCTGACGCACGACCAGATCGCCTCCCGCCTCGACATGCCATTGGGAACCGTGAAAAGCCATATCCGCAGGAGCCTGACGCGACTGCGACGACGACTGGAGGTGGGTCATGTCGCATCTTGA
PROTEIN sequence
Length: 195
MSSAVLREGTPVDEIEEQELHERFRQGDERALEAIYRRWSPIVFTLALRSLGDRGDAEDVTQKTFVSAWTSRASYDPSKAKLSTWLVAIAKRRIADMHEARARVRALQEQLQRTAHPDDLVGHEVDLGDSLLLADELQRLEPDAQRVVRLAFYDDLTHDQIASRLDMPLGTVKSHIRRSLTRLRRRLEVGHVAS*