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cn_combo_scaffold_1316_20

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: comp(17282..17779)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhodococcus sp. 29MFTsu3.1 RepID=UPI00036E20D7 similarity UNIREF
DB: UNIREF100
  • Identity: 38.9
  • Coverage: 162.0
  • Bit_score: 133
  • Evalue 1.60e-28
TetR family transcriptional regulator {ECO:0000313|EMBL:KJR10812.1}; TaxID=1844 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.0
  • Coverage: 158.0
  • Bit_score: 106
  • Evalue 3.80e-20
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 37.2
  • Coverage: 164.0
  • Bit_score: 99
  • Evalue 1.20e-18

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Taxonomy

Nocardioides luteus → Nocardioides → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 498
ATGGCGGATGTCGCGGCGGAGGCAGGCATCAGCATCCGAACCTTGCACCGCTACTTCCCCGCGAAGGCCGACATCGTCTGGGGGCCCGTGGATATCTCGTTCCAGTCGTTGCGGCAGCGCCTCGATGAGACGCCGGTCGGGATGCCGCTCGCAAGGGCGCTGCGCGAGGGCATCATCGCCTCGTTCTCCGACCACCCGGAGGACAAGTCCACGACTCGGCTGCGCATGCGCCTGATCGGGCGCACTCCGGAGCTCAGGGCGAACAGCTCGGAGCCGTTCAGGCGCTGGCGCCAGTCAATCGTCGACTTCGTCGCTGAGCGCACCGGTTCGGATCCGCTCGACCTGCTGCCGACCGTCGCTGGCTCGGCGGTGCAAGTCACCACCATGTCGGCTCTTGTCTGGTGGGCCACCAACATCGAGGCCGGTGACCCGGACGTCGCGGTTGCGGAGGCCCTCGACGCGCTCGGCGCGGGGTTCTCGGCGGCCTTCGCTCGCTGA
PROTEIN sequence
Length: 166
MADVAAEAGISIRTLHRYFPAKADIVWGPVDISFQSLRQRLDETPVGMPLARALREGIIASFSDHPEDKSTTRLRMRLIGRTPELRANSSEPFRRWRQSIVDFVAERTGSDPLDLLPTVAGSAVQVTTMSALVWWATNIEAGDPDVAVAEALDALGAGFSAAFAR*