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cn_combo_scaffold_1367_12

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: comp(10493..11476)

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide export system ATP-binding protein LptB {ECO:0000313|EMBL:KJQ55044.1}; EC=3.6.3.- {ECO:0000313|EMBL:KJQ55044.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Micr similarity UNIPROT
DB: UniProtKB
  • Identity: 81.6
  • Coverage: 320.0
  • Bit_score: 517
  • Evalue 1.90e-143
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003829F57 similarity UNIREF
DB: UNIREF100
  • Identity: 82.2
  • Coverage: 349.0
  • Bit_score: 557
  • Evalue 8.80e-156
livG; branched-chain amino acid ABC transporter,ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 67.4
  • Coverage: 304.0
  • Bit_score: 404
  • Evalue 2.10e-110

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Taxonomy

Microbacterium sp. SA39 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 984
TTGTCAAGTAACCCGTCATCCAGCCCGGCGCCGGGCGCGCGTCGCCCGAAGACCACGGGCCTCGCCACCGGCGAGGCGGTCCCCGGCGTCGCCAAGACCGATCCGATCATGGTCATCGACCACGTCACGCGACGCTTCGGCGGCCTCACCGCCGTCGACGTGGAGCACCTCGAGATCCCACGCCATGCGATCACGGCCCTCATCGGGCCGAACGGCGCCGGAAAGACGACGCTGTTCAACCTGCTGTGCGGCTTCGACAAGCCGAACTCGGGCACCTGGTCCTACGACGGGAAGCAGCTCTCCGGCATCCCGTCGTTCAAGGTGGCCCGCATGGGTCAGGTGCGCACCTTCCAGCTGACGAAGGCGCTGTCGCTGCTGACGGTGCTCGAGAACATGAAGCTCGGTGCCGCGCATCAGAAGGGCGAGAGCCTCTGGGCGAGCATCATCCCCGCGATCTGGCGGAAGCAGGAGACCGACATCGAGGCGAAGGCGCGCGAGCTCCTCGCCCGCTTCAAGCTCGACGCCAAGTCGGATGACTACGCGGCTTCCCTCTCGGGCGGGCAGCGCAAGCTCCTCGAGATGGCGCGCGCGCTCATGAGCGACCCGCAGCTGGTCATGCTGGACGAGCCGATGGCGGGCGTGAACCCGGCCCTCACGCAGTCGCTGCTCGATCACATCCTCGACCTCAAGGACCTCGGCATGACCGTGCTGTTCGTCGAGCACGACATGCACATGGTCCGCCACATCGCCGACTGGGTCGTCGTCATGGCCGAAGGCCGCGTCGTCGCCGAGGGCCCGCCGGACACGGTCATGAACGACAAGGCCGTCATCGACGCCTATCTCGGCAGCCATCAGGATGTCGACCTCGGCGTGGTGACCGGTCGTGTCGCCGGCGAGATGAACACCGAGGCGATCCAGCTGATGGAAGAGATCAAGGAGGCCGAGGAGGCCGCCGTGCACGAGGCCGAAGAGGAGCAGAAATGA
PROTEIN sequence
Length: 328
LSSNPSSSPAPGARRPKTTGLATGEAVPGVAKTDPIMVIDHVTRRFGGLTAVDVEHLEIPRHAITALIGPNGAGKTTLFNLLCGFDKPNSGTWSYDGKQLSGIPSFKVARMGQVRTFQLTKALSLLTVLENMKLGAAHQKGESLWASIIPAIWRKQETDIEAKARELLARFKLDAKSDDYAASLSGGQRKLLEMARALMSDPQLVMLDEPMAGVNPALTQSLLDHILDLKDLGMTVLFVEHDMHMVRHIADWVVVMAEGRVVAEGPPDTVMNDKAVIDAYLGSHQDVDLGVVTGRVAGEMNTEAIQLMEEIKEAEEAAVHEAEEEQK*