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cn_combo_scaffold_1534_21

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: comp(19837..20697)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003035B83 similarity UNIREF
DB: UNIREF100
  • Identity: 65.2
  • Coverage: 287.0
  • Bit_score: 399
  • Evalue 2.10e-108
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.3
  • Coverage: 280.0
  • Bit_score: 361
  • Evalue 1.50e-96
rfbA; O-antigen export system permease RfbA similarity KEGG
DB: KEGG
  • Identity: 52.6
  • Coverage: 285.0
  • Bit_score: 316
  • Evalue 6.50e-84

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Taxonomy

Leucobacter sp. UCD-THU → Leucobacter → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 861
TTGACGACAATCGATCTCAGTCAATACGACGTGCCCGGGCGCGGTTTGGGCATCCTGGACGTATTTAGATGGCGATACCTGCTGCGTCTTCTGGTGCGCAAGGGCACAGCGACCCGCTATCGCAACTCCGTCCTCGGCTGGACGTGGTCCTACGTCAAGCCCGCCGCGCAGTTCGTCATCTACTACTTCGTGATGGGCGTCATTCTGCGGATCCATGACGACGTGCAGAATTTCGCGATCTACCTGTTCGCGGGTGTCGTCGCGATCAACCTCTTCAACGAGGGATTCGGTAACGCTACGAACTCAATCGTGGACAACGGCTCGCTCGTGCGGAAGATCTATCTGCCCCGTGAACTGTTCCCAATCGCCGCGATCATCGTGGCCTTCGTCCACTTTCTGCCGCAGCTCGCGATCCTGCTGCTCGTGTGCATCCTGCTCGGGTGGACGCCGTCGCTCCTTGCGGTTGGGGCCGCGCTGCTCGGCATCATCATCGTCGTCACCTTCGCACTCGGTCTGGGACTGTTCTTCAGCGGAATCAACGTCCGTTTCAGGGATGCCCAGAACGTCGTGGAGATCATCCGGATGTTCTCCACGTGGACCTCGCCCGTCCTCTACATGTGGGTCCTCGTCCAGGCAGCGATGCCCGCCTGGGCGTTCGCCATTTACATGGCAAACCCGCTGACGATCGCCGTCGAACTCTTCCACTTCGCCTTCTGGGAAGGAACCGTGACCGCAAGCCACGGACTCCCGCCAAATTTCGGTGCCTACATTGGAATCGCACTCGCCCTGTGCGCACTTTCACTAATCGTGGGCCAAGCCATCTTCCGTCGCTTCGAGCGAACCTTCGCACAGGATCTCTGA
PROTEIN sequence
Length: 287
LTTIDLSQYDVPGRGLGILDVFRWRYLLRLLVRKGTATRYRNSVLGWTWSYVKPAAQFVIYYFVMGVILRIHDDVQNFAIYLFAGVVAINLFNEGFGNATNSIVDNGSLVRKIYLPRELFPIAAIIVAFVHFLPQLAILLLVCILLGWTPSLLAVGAALLGIIIVVTFALGLGLFFSGINVRFRDAQNVVEIIRMFSTWTSPVLYMWVLVQAAMPAWAFAIYMANPLTIAVELFHFAFWEGTVTASHGLPPNFGAYIGIALALCALSLIVGQAIFRRFERTFAQDL*