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cn_combo_scaffold_1663_33

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: 31358..31618

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S20 n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036F2B00 similarity UNIREF
DB: UNIREF100
  • Identity: 90.7
  • Coverage: 86.0
  • Bit_score: 149
  • Evalue 1.10e-33
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans similarity UNIPROT
DB: UniProtKB
  • Identity: 89.5
  • Coverage: 86.0
  • Bit_score: 148
  • Evalue 4.60e-33
rpsT; ribosomal protein S20 similarity KEGG
DB: KEGG
  • Identity: 81.4
  • Coverage: 86.0
  • Bit_score: 132
  • Evalue 5.20e-29

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Taxonomy

Microbacterium laevaniformans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 261
GTGGCGAACATCAAGTCGCAGATCAAGCGCAACAAGACCAACGAGAAGGCCCGCGAGCGCAACAAGGCGGTCAAGAGCGAGCTGAAGACCGAGGTGCGTCGCACCCGCGAGGCCGTCGCCTCGGGCGACAAGGCCGCGGCCGAGACCGCGCTGCGCAAGGCCAACAAGAAGCTCGACAAGGCTGTGAGCAAGGGCGTCATCCACGCCAACCAGGCTGCGAACCGCAAGTCGGCGATCGCCAAGCAGGTCGCGTCCATCTGA
PROTEIN sequence
Length: 87
VANIKSQIKRNKTNEKARERNKAVKSELKTEVRRTREAVASGDKAAAETALRKANKKLDKAVSKGVIHANQAANRKSAIAKQVASI*