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cn_combo_scaffold_1692_12

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: comp(11589..15188)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=273677 species="Bacteria; Ac similarity UNIPROT
DB: UniProtKB
  • Identity: 79.7
  • Coverage: 999.99
  • Bit_score: 1883
  • Evalue 0.0
transcription-repair coupling factor n=1 Tax=Microbacterium yannicii RepID=UPI0002E99FBC similarity UNIREF
DB: UNIREF100
  • Identity: 85.0
  • Coverage: 999.99
  • Bit_score: 2008
  • Evalue 0.0
mfd; transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 79.9
  • Coverage: 999.99
  • Bit_score: 1868
  • Evalue 0.0

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Taxonomy

Microbacterium oleivorans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3600
GTGACAGTTCCCGGGATCCTCCGCGCCCTCGAACAGGCCGAATCGTTTCGGGATGCCGTCGCCGCGGCATCCGTCGACGCCGATTTCTCGCTCGTCGAAGGCCTGGACGCCCCCCTCGTCGCCGCTCTCCTCGAACGACGACGTGCGGCGGGACACCCGCCCGTCGTCCTCGTCATCGCCCCCACCGGGCGCCGCGCGGAATCCTTCGGTCCGGCGCTGCGCTCCCTCGTGCCCGGCGCCGAGATGCTGCACTTCCCCGCGTGGGAGACCCTCCCGCACGAGCGGCTGAGCCCGAGTGCCGAGATCGTCGGCCGACGTCTGGAGGCCCTCGGGCGGATCGCGGAGTGGTCCGGGACCACGCCGCTGGTGATCACCGCCTCCGTGCGGGCCGCGGTCCAGCCGCTGGCCGCCGGGCTCACCGACATCCGCTCCGTGGTGCTGACGGCGGGGAGCCGCGCCCACGATCTCGCCGACGTGGCGCGCGAGCTGGTGACACTCGCGTACCACCGCGTGGACATGGTGTCCCGCCGGGGCGAGTTCGCCGTGCGCGGTGGAATCCTCGACGTCTTCCCGCCGACGGCGGCACACCCCTTCCGTGTGGAGTTCTTCGGCGACGAGGTCGATCAGATCCGCGCGTTCTCCGTGGCCGATCAGCGCTCCCTCCCCGGGGAGATCGCGGAGGTCTCCCTCATCGCCAGCCGCGAACTGCTGCTCACCGACGCCGTGCGCGAGCGCGCGGCGGGTCTGACGGAGTCGTTCCCGGGCCTGCGGTCGATGCTGGAGAAGATGTCCGAGGGCATTCCCGTGGAGGGCATGGAGTCGCTCCTGCCCGCGGTCGCCGATCGACTGGTGAGCCTCGCGGACTATCTGCCCGAACGGGCCGCGGTCGTGTTGGTCGAGCCGGAGCGCGCCATCACCCGGGCGATCACGCTCAGCGACACGAACCGCGAGTTCCTCGATGCGGCATGGAGCGCGGCGACGGCAGGGGCCAAGACGCCGGTCGATCTCGGAGCGGGCGATTTCCTCTCCCTTCCCGCTCTCCGTGCCGCCGCCGCGGAGCGCGGGGACGTGTGGTGGACCCTCAGCACCTTCGATTCCGGAGCGGCGGATGCCCTCGCGGAGGGCCTCATCGACATCGACGTCGCGCTGGAGCGGTCGGCGACCATCCGTGTGCCCGGTGCTCCCGTGCCCTCCTTCCACGGCAACGTCGACGGCGCGATCGAGCACGTCGCGGGGCTCCTCGCCGACGGCTGGCGGGTCGTGGTGGCCGCCTCCGGCGCGGGGCTCGTCGAGCGCGCCCGCGACGTCCTGGCCGAGCACGGCACGGCCGCGCGCGTGGTGTCCGATCTCGCCGAGCTCCCGGAGCCGGGGGTCGTCCACGCGGTCGTGACCGAACTCGAGCGTGGCTTCGAAGTCGCCGACGCGCGCCTGGCGGTCCTCACCGAGTCGGAGTTCTACGGGCGGACCATCGGCGGCGACCAGCGGGTGGTGAAGAAGCTCGCATCGCGGCGGAAGAACGTCGTCGACCCGTTGCAGCTGAAGGCCGGCGACATCGTCGTCCACGCCACCCACGGTATCGGCCGCTTCATCGAGCTCACTCAGCGGGAGGTCTCCTCCGGGGGGCGCAACGCGGTGAAGACGACGCGCGAGTACCTCGTGCTGGAGTACGCGCCGTCCAAGCGCGGCTACCCGGGGGACCGTCTCTTCGTCCCCACCGATCAGTTGGACCTCCTCTCGCGCTACGTCGGGGGAGAGGCGCCGACGCTGTCGAAGATGGGCGGCAGCGATTGGGCCGCCGCGAAGGGCAAGGCGCGCCGGGCCGTCCGCGACATCGCGGTCGAGCTGGTGAAGCTGTACTCGGCGCGGATGTCGGCCAAGGGTCACGCGTTCGGACCAGACACGCCCTGGCAGCGGGAGCTGGAGGAGGCCTTCCCCTTCGCCGAGACCCCCGATCAGCTCCAGACGATCGACGAGATCAAAGCCGACATGGAGAAGCCGGTCCCGATGGACCGCCTGCTCTCCGGAGACGTCGGGTTCGGCAAGACCGAGGTGGCCGTGCGCGCGGCCTTCAAGGCCATCCAGGACGGCAAACAGGTCGCGATGCTCGTGCCCACCACGCTTCTGGTGAAGCAGCACACCGAGACCTTCACCGAGCGCTTCGCCGGATTCCCCGTGAAGGTCCGGGCGCTGTCGCGCTTCCAGACCGACAAGCAGGCCACGGAGATCGTCGCGGGCCTTGCCGACGGCACGATCGACATGGTCATCGGCACCCACCGCATCCTCACCGAGAAGGTGATCTTCAAGGATCTCGGACTGATGATCATCGACGAGGAGCAGCGGTTCGGCGTCGAGCACAAGGATGCCCTGAAGAAGCTGAAGACCAACGTCGACATCCTCGCCATGAGTGCGACGCCGATCCCCCGGACCCTGGAGATGGCCGTCACCGGCATCCGGGAGATGTCCACGCTCGCGACCCCTCCGGAGGACCGGCATCCGATCCTGTCTTACGTCGGAGCGCGCAACGACAAGCAGATCGCCGCGGCGATCCGACGGGAGCTCCTGCGCGAGGGGCAGGTGTTCTACGTGCACAACCGCGTTCAGTCGATCCAGCGGGTGGCGGCCGATCTGGCCGAGCTCGTACCGGAGGCACGCATCGCCGTGGCGCACGGGCAGATGGGCGAGCATCAGCTCGAACAGGTGGTGGACGACTTCTGGGAGCGCAAGGCCGACGTCCTCGTCTCGACGACCATCATCGAGACGGGTCTGGACATCGCCAACGCGAACACGATCATCATCGACCGCGCCGACAAGTACGGACTCAGCCAGCTCCACCAGCTTCGAGGTCGCGTCGGGCGCGCGCGCGAACGCGCCTACGCCTACTTCCTCTACGACGATCAGAAGCCGCTGTCCGAGACGGCGGCCGATCGGTTGGAGACGATCGCCGTCAACAACGACCTCGGTTCCGGGATGCAGGTCGCGCTCAAGGACCTCGAGATCCGCGGAGCGGGAAACCTCCTCGGCGCCGAGCAGGCCGGTCACATCGCGGGGGTCGGCTTCGACCTCTACCTGCGCATGATCGGCGAAGCCGTCGCGACCTTCCGCGGCGAGGAGACCGAGGGGCCCGCCGAGCTGCGCCTGGAGCTCCCCGTCGAGGCGCGCATCCCCGACTCGTACATCGACAGCGAGCGGCTCCGCCTCGAGGCCTACCAGAAGCTCTCCGCCGCGGCGTCGGCCACCGCGAAGGAGGGCGCGATCGCCCTCGTCCGCGAGGAACTCGCCGACCGCTACGGCGCACCGCCGGAGGAGGTCGAGGGGCTCTTCTCGATCGCCCACCTGCGCCGACGGGCCGCGCGCGCCCAGCTCGCCGACGTCGTGGCGATGGGCCCGAACCTCCGGATCGCGCCCGCGAACCTCCCCGATTCGATGCGCGTGCGCCTGCAGCGCCTGTACCCGAAGGCGAAGCTCCTCGCCGGGGGCGACGCGCTCGTGGTGCCGCTGCCGACCGCGGACGGCGCGATCCTCACGGATGCGGCGCTGGTGGCGTGGGTGGCGCAGCTTTTGGATCAGCTGTGGCCGGAGCCGGAGCAGACCGCGGGGTAG
PROTEIN sequence
Length: 1200
VTVPGILRALEQAESFRDAVAAASVDADFSLVEGLDAPLVAALLERRRAAGHPPVVLVIAPTGRRAESFGPALRSLVPGAEMLHFPAWETLPHERLSPSAEIVGRRLEALGRIAEWSGTTPLVITASVRAAVQPLAAGLTDIRSVVLTAGSRAHDLADVARELVTLAYHRVDMVSRRGEFAVRGGILDVFPPTAAHPFRVEFFGDEVDQIRAFSVADQRSLPGEIAEVSLIASRELLLTDAVRERAAGLTESFPGLRSMLEKMSEGIPVEGMESLLPAVADRLVSLADYLPERAAVVLVEPERAITRAITLSDTNREFLDAAWSAATAGAKTPVDLGAGDFLSLPALRAAAAERGDVWWTLSTFDSGAADALAEGLIDIDVALERSATIRVPGAPVPSFHGNVDGAIEHVAGLLADGWRVVVAASGAGLVERARDVLAEHGTAARVVSDLAELPEPGVVHAVVTELERGFEVADARLAVLTESEFYGRTIGGDQRVVKKLASRRKNVVDPLQLKAGDIVVHATHGIGRFIELTQREVSSGGRNAVKTTREYLVLEYAPSKRGYPGDRLFVPTDQLDLLSRYVGGEAPTLSKMGGSDWAAAKGKARRAVRDIAVELVKLYSARMSAKGHAFGPDTPWQRELEEAFPFAETPDQLQTIDEIKADMEKPVPMDRLLSGDVGFGKTEVAVRAAFKAIQDGKQVAMLVPTTLLVKQHTETFTERFAGFPVKVRALSRFQTDKQATEIVAGLADGTIDMVIGTHRILTEKVIFKDLGLMIIDEEQRFGVEHKDALKKLKTNVDILAMSATPIPRTLEMAVTGIREMSTLATPPEDRHPILSYVGARNDKQIAAAIRRELLREGQVFYVHNRVQSIQRVAADLAELVPEARIAVAHGQMGEHQLEQVVDDFWERKADVLVSTTIIETGLDIANANTIIIDRADKYGLSQLHQLRGRVGRARERAYAYFLYDDQKPLSETAADRLETIAVNNDLGSGMQVALKDLEIRGAGNLLGAEQAGHIAGVGFDLYLRMIGEAVATFRGEETEGPAELRLELPVEARIPDSYIDSERLRLEAYQKLSAAASATAKEGAIALVREELADRYGAPPEEVEGLFSIAHLRRRAARAQLADVVAMGPNLRIAPANLPDSMRVRLQRLYPKAKLLAGGDALVVPLPTADGAILTDAALVAWVAQLLDQLWPEPEQTAG*