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cn_combo_scaffold_1955_23

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: comp(28584..29636)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00030AE689 similarity UNIREF
DB: UNIREF100
  • Identity: 62.1
  • Coverage: 351.0
  • Bit_score: 402
  • Evalue 3.90e-109
Geranylgeranyl pyrophosphate synthase {ECO:0000313|EMBL:CDJ98926.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C44 similarity UNIPROT
DB: UniProtKB
  • Identity: 59.8
  • Coverage: 343.0
  • Bit_score: 388
  • Evalue 8.20e-105
geranylgeranyl pyrophosphate synthase similarity KEGG
DB: KEGG
  • Identity: 57.5
  • Coverage: 355.0
  • Bit_score: 368
  • Evalue 3.00e-99

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Taxonomy

Microbacterium sp. C448 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1053
ATGATCGCACTCTCCCCGCATCCGCAGATCGACGACACGATCCATGAGGCGCTCGCGCGGATGCGATGTCGACGTGGTGCGCTCGGCGAGGCGTTCGATGCATTGATCGACGCCTCCGACCGCGCAGCTCGCGGTGGCAAGCGTTTCCGTCCCGCGCTCGTCGTCGCCGCCTTCGAGAGCCTCGGCGGCGACCTGGGTGCCGCTCCCGGCGTGTTCCCGGTCGCCGCCGCCTTCGAACTGCTCCATACGGCATTCGTCGTCCACGACGACGTGATCGATCACGACACCGTCCGTCGCGGCATCCCCAACGTCGCCGGGGAGTTCCGCCGGCGTGCCGAGGAGCAGGGAGCGGATGCCGCGGGTGCCGCCCTCCTCGGGGACGCGGCGGCCATCCTCGCCGGCGACCTCCTGCTGCATGAGGCCTTTCGGCTCATCGCCCTCGCACCGGTGGATCTGACCGCCCGCGTGCGGCTGATGGAGCTCCTCGACGAGGCCATGTACGTCTCCGCGGCCGGCGAGCTGGCGGACGTGGAGAACAGTGTCGTCGACGATGCCCCGCACCACGCCGTCCTCGACGCGGCCTACAACAAGACCGCCGTCTACTCGTTCAGCGCTCCGCTCTGCGCGGGCGCCGCGCTGGCCGGGGCGTCCCCGAAGGTCACCGGACTCCTCGAGCGCGCGGGCGGTCAGCTCGGTCTCGCATTCCAGTTCGTGGACGACCTCATCGGCGCTTTCGGCACCGACGATCAGGCAGGACGCGCGAGCGGGGGCGACCTGCGCGAGGGCAAACGGACACCGCTGGTCTCGCTCGCCCGCGAGAGTGCGACCTGGGCTCAGGTCAACGACGCGATCGCCGTCGCACACACCGGTCCCATCGCCGTGCAAGAGGCGCAGCGGATCCTCGAGGCCAGTGGAGCCCGGGCGCAGATGCGCGCACTCGTCGACGGCGCGCTCGCCGAGGTGCGCGGAGTGTCCGCCGATCCCGCACTGCCGGCGTCCGCGGGGTCCCTCCTGCGCGCGCTCGCCGACGGGGTCGAAAGTCGCATCCCATGA
PROTEIN sequence
Length: 351
MIALSPHPQIDDTIHEALARMRCRRGALGEAFDALIDASDRAARGGKRFRPALVVAAFESLGGDLGAAPGVFPVAAAFELLHTAFVVHDDVIDHDTVRRGIPNVAGEFRRRAEEQGADAAGAALLGDAAAILAGDLLLHEAFRLIALAPVDLTARVRLMELLDEAMYVSAAGELADVENSVVDDAPHHAVLDAAYNKTAVYSFSAPLCAGAALAGASPKVTGLLERAGGQLGLAFQFVDDLIGAFGTDDQAGRASGGDLREGKRTPLVSLARESATWAQVNDAIAVAHTGPIAVQEAQRILEASGARAQMRALVDGALAEVRGVSADPALPASAGSLLRALADGVESRIP*