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cn_combo_scaffold_2587_19

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: 18445..20148

Top 3 Functional Annotations

Value Algorithm Source
Thiamine pyrophosphate protein TPP binding domain protein n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6YAT0_THEBD similarity UNIREF
DB: UNIREF100
  • Identity: 43.9
  • Coverage: 533.0
  • Bit_score: 388
  • Evalue 1.20e-104
Acetolactate synthase {ECO:0000313|EMBL:EWT03612.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470. similarity UNIPROT
DB: UniProtKB
  • Identity: 47.0
  • Coverage: 536.0
  • Bit_score: 430
  • Evalue 4.00e-117
thiamine pyrophosphate domain-containing TPP-binding protein similarity KEGG
DB: KEGG
  • Identity: 43.9
  • Coverage: 533.0
  • Bit_score: 388
  • Evalue 3.50e-105

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Taxonomy

Intrasporangium oryzae → Intrasporangium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1704
ATGGCGGTCATCGACGTGGAACGGAACGCCCAGCCGTCTCAGCCCGAGGGCGATGACGCAGAGAGTGTCGGCGAGTTCGCGGCCGCATGTCTGCGTGCGAACGGTGTCAGCACCGTGTTCGGGATCCCGGGCACGCACAACATCGAGATCTACCGCGGTCTTCAGCGGTACGGCATCCGTCACATCCTGACGCGCCATGAGCAGGGCGCGGTGTACGCGGCCGACGGCTATGCGCGCGCGACAGGCCGGCCGGGTGTCGTCGTCGCGACGAGCGGGCCCGGGGTGACCAATTGCATCACGGGCATCGCGAACGCCTACGCCGACAGCATCCCGGTCCTGGTTCTGTCGCCGGGGCCGGCCAGGGGCGAGGAACGTCGAGACCTCGGATTCCTCCATGAGGCGAAGGATCAGCGTTCCGGGATGGACAATTTCGCAGGCAGGAGCGTCCGGGTCGAGTCGCGGGAGGCACTCGAACAGGCGATACACGGTGCCTTCCTCAGCTGGCGCACAGATCGCGCGCGTCCGGTGCATGTCGAGATCCCGACGGATCTGATCGCAGAGCGCTCGCCCGTGGCGCAGACGTCCGCGTGGCAGGGTGCCCCGCCCGTCCCCGCCGCGGAAGCCCTCTCTGCGGTGATCGGCGCGCTTCAGGATGCAGTCCGACCGATCATCATCGCCGGGGGAGGATGCCTCGACCACTCTGCCGCGCTGACGGCATTCGTGGACGCGACTCAGATCCCCGTGGTCACCACTCTCCAGGGGAAGGGATCGGTCGACGAACGCCATCCTCTCGCGTGCGGGGCACTTGCCGGAAGCACATCCGGCTTCGCGCCCGTCGCGAGGGCCGACCTCATCCTCGCGTTGGGTACGGAACTCAAGAGTGCCGAGATCGCGCGCCACGCGCGTGTCGCCCGCTTCGACATCGATCCGGCGCAGCTGCACAAACACCATGTATCGGCGCTCCCCGTTCTCGGCGATGTCGGAGCAGCGCTTACGGCGATGCTCGCCCATCCGGGATTCCCCGAGATGCCGTTCTCGAGCGAGTGGAGGAACGGAGTCCTCGCCGAGGCCGATGCACTGCGATCGGGGGTGGACGAGGAGTGGGCGGTGCTTCATCAGGCGATCAGCGGTGCCGCGGAGGGAACAACGAAGACGCCGACGGTGCTGACCGGGGACAGCTCACAGATCTCCTGGCTCGGCACCACCCGCAGCGCCGTCTTGGATGGGCCGAGACAGTTCCTTTCGACGGACGGATTCGCGACGCTGGGCTACGGGCTCCCCGCCGCCATCGGGGCGAAGCTCGCCCGCCCCGAGGCGGCGGTGGTCGGGATGATGGGAGATGGCGCGTTGATGTTCAGCGTGCAGGAACTCGCCACGGCCAGCGAGATCGGACTGTCGCTTCCCGTCGTCGTCTTCGATAACGGCGGCTATGCCGAGATCAGGAAGAACATGGGCGATGCAGGCATCGTGCCCATCGCCGTCGATCTCGCGCGGCCCGACTACCCCGCACTGGCGGCGGCGTTCCACTGTGGCTTCGAGGCTCCGGCGACACCCTCGCAGCTGGCGGCGTCCGTACGCGAAGCGCTCACCGCAGAACGTCCGACCGTCATCGTCGTCGACGCCGGTCACTTCGCCGGAGAATCCTGGCGGTTGTCTCGATCGATATCGCCCGCTGAGAGAGGTCGTGATGGCGAAGAAGGATGA
PROTEIN sequence
Length: 568
MAVIDVERNAQPSQPEGDDAESVGEFAAACLRANGVSTVFGIPGTHNIEIYRGLQRYGIRHILTRHEQGAVYAADGYARATGRPGVVVATSGPGVTNCITGIANAYADSIPVLVLSPGPARGEERRDLGFLHEAKDQRSGMDNFAGRSVRVESREALEQAIHGAFLSWRTDRARPVHVEIPTDLIAERSPVAQTSAWQGAPPVPAAEALSAVIGALQDAVRPIIIAGGGCLDHSAALTAFVDATQIPVVTTLQGKGSVDERHPLACGALAGSTSGFAPVARADLILALGTELKSAEIARHARVARFDIDPAQLHKHHVSALPVLGDVGAALTAMLAHPGFPEMPFSSEWRNGVLAEADALRSGVDEEWAVLHQAISGAAEGTTKTPTVLTGDSSQISWLGTTRSAVLDGPRQFLSTDGFATLGYGLPAAIGAKLARPEAAVVGMMGDGALMFSVQELATASEIGLSLPVVVFDNGGYAEIRKNMGDAGIVPIAVDLARPDYPALAAAFHCGFEAPATPSQLAASVREALTAERPTVIVVDAGHFAGESWRLSRSISPAERGRDGEEG*