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cn_combo_scaffold_2664_6

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: 6377..7690

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002DB0C0E similarity UNIREF
DB: UNIREF100
  • Identity: 70.9
  • Coverage: 446.0
  • Bit_score: 621
  • Evalue 8.70e-175
Putative O-antigen ligase {ECO:0000313|EMBL:GAD35600.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.5
  • Coverage: 435.0
  • Bit_score: 516
  • Evalue 3.20e-143
lipid A core - O-antigen ligase similarity KEGG
DB: KEGG
  • Identity: 61.0
  • Coverage: 421.0
  • Bit_score: 511
  • Evalue 2.70e-142

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Taxonomy

Microbacterium sp. TS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1314
GTGAGCGGCGGGGGCACCCCCTCCTCCGGGTGGGTGACGACTCTCCTCGCCTCGGCATCCTTCGCCCGCGCCTACACGCTCACCGTCTTCGCGGCGGTGTTCTCTTCGTTCGCGATCGAGCGGCTCATGAGCCCGACCACGTATGTGACGATCGTCGCCGGGCTCTGCATTCTCGGCGTCGGAATCCTCGTCGCGCGGCGCGACGAGATCGCGCTGCTGCGGCTCGTCCCGTTCACAGTGCTCGCGTTCATCGCGTGGGCGACGATCAGCGCGGTCTGGAGCACGGATGCCGCCGCCACGCTGCGGAACGCCCTCACCCTCGCGGGGATCGGGCTCCTGGCCGTCGTCATCGGCCACATCCGCGACACCCTGCAAACCGTCCGCGCGCTCGGTGACGTCCTGCGGACGCTTCTCGGCATCTCGCTGGGCGTGGAGATCCTGTCGGGCATCCTCCTCGACACGCCCTTCCGTTTCCTCGCCGTCGAGGGGAACCTCGCTTCACTCGGGCCGGTGCAGGGCATCTTCGGCACCCGCAACCTGCTGGGTTTCGTCGCGGTGCTCGCCCTCATCACCTTCCTCATCGAATACCGCACGCAGTCGGTGCGCACGGGGGTGTCGGTCGCCTCGGTGATCCTCGCGGGGTCGCTCGCCGCGTTCAGCGACTCCCCCACCGTCCTCGTCCTCGCCGTCGCCGTCGGTCTCGCCGTCCTCGCGCTGGTGCTGGTGCGCCGCGTCCGCCCCGACCGCCGACGTGCCGTGCAGTTCACTCTCGGCGGGGTGGTCGTCGTCGGGATCACCGTCGGATACGCGCTGCGGCATCCGATCGTCGCGCTCCTCGGCGCGGGCACCGACTTCTCGATGCGCGTCGACCTGTGGAACCTGATGGTCGACTACCTGCGGTTCCGCCCCGTGCAGGGGTGGGGGTGGTACGGCCCGTGGGACGACGGCGAGTTCCCCTTCAACGCGCTGAACTTCGCGCTGCGCTCGGAACACGCCACCGGCCTCAACGCCTACTTCGACGTGCTCCTCCAGCTCGGATGGCTGGGCCTCCTCCACTTCTTCGCCCTCGCCGGCATCGCGCTGGTGCGCTCGTGGCTGGTGGCGACCGAACGCCGCTCGGTCGTCTACGCCTGGACGCCCCTCATCCTCGTCGCCCTCCTCGTCGACTCGATGTTCGAGAGCTTCACCCTCACCGGCCTCGGCTGGCTCATGCTCGTCCTCTGCGCCGTCCGCGCCGGCCAGTCCCGCTCGTGGCGCGAGCGCATCGGCGAGCGCCTCGACCCGAGCCTTCCGCCCGCCGCACCGGGGCTGTGA
PROTEIN sequence
Length: 438
VSGGGTPSSGWVTTLLASASFARAYTLTVFAAVFSSFAIERLMSPTTYVTIVAGLCILGVGILVARRDEIALLRLVPFTVLAFIAWATISAVWSTDAAATLRNALTLAGIGLLAVVIGHIRDTLQTVRALGDVLRTLLGISLGVEILSGILLDTPFRFLAVEGNLASLGPVQGIFGTRNLLGFVAVLALITFLIEYRTQSVRTGVSVASVILAGSLAAFSDSPTVLVLAVAVGLAVLALVLVRRVRPDRRRAVQFTLGGVVVVGITVGYALRHPIVALLGAGTDFSMRVDLWNLMVDYLRFRPVQGWGWYGPWDDGEFPFNALNFALRSEHATGLNAYFDVLLQLGWLGLLHFFALAGIALVRSWLVATERRSVVYAWTPLILVALLVDSMFESFTLTGLGWLMLVLCAVRAGQSRSWRERIGERLDPSLPPAAPGL*