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cn_combo_scaffold_3827_7

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: 4466..5125

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003616157 similarity UNIREF
DB: UNIREF100
  • Identity: 75.1
  • Coverage: 201.0
  • Bit_score: 327
  • Evalue 1.30e-86
RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:KJQ56082.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.0
  • Coverage: 194.0
  • Bit_score: 266
  • Evalue 3.80e-68
sigma-70 region 2 domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 53.2
  • Coverage: 201.0
  • Bit_score: 208
  • Evalue 1.90e-51

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Taxonomy

Microbacterium sp. SA39 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 660
ATGTATCAGTCCGCGCCTTCCGCTCTCTGTGGTCGTGTGGACACAATGGTCGTCATGACGCAACCCGGCGCCGAGACGTCCGTCGACCCTGCGGAGCCCGCTCGGTGGCAGCGCGCCGCCGCGCTGTTCGTGCGGTGGCGAGACGGCGACGCGCGGGCGATGGACGACCTCGTCCGGCTCATGACCCCGCCGCTGTGGCACATCGTGCGCTCCTACGGCCTCGACCACGCCCTCGCTCAGGACGTCGTGCAGACGACGTGGCTGACGCTCGTGCGCACCCACGCGTCGATCCAGGACCCGCAGGCGATCTCGGGGTGGCTCGCCATGTGCGCTCGACGCGAGGCGTGGAAGGTCGGCAAGGCCCACGGCCGAGCCGACGCCACCGACGCGCCGGCGCTCGAAGAACGACTGCCCGTGGCGGACTCCGCCGAGGACGTCGCCGTCGACGCCGACCGTTCGCGACGGCTGTGGCGCGCTCTCGCGACCCTCGACGAACGGTGCCGCAGGCTGCTGCGCATCATCGCGTTCGACGACCGCCCTGACTACGCACGCATCGCGAAAGACCTCGCGATGCCCATCGGATCCATCGGCCCCACCCGCGGCCGGTGCCTGACCAAACTCCGCTCGTCGCTGGACCGCGACGGGTGGGAAGGGAACTGA
PROTEIN sequence
Length: 220
MYQSAPSALCGRVDTMVVMTQPGAETSVDPAEPARWQRAAALFVRWRDGDARAMDDLVRLMTPPLWHIVRSYGLDHALAQDVVQTTWLTLVRTHASIQDPQAISGWLAMCARREAWKVGKAHGRADATDAPALEERLPVADSAEDVAVDADRSRRLWRALATLDERCRRLLRIIAFDDRPDYARIAKDLAMPIGSIGPTRGRCLTKLRSSLDRDGWEGN*