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cn_combo_scaffold_5086_4

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: 2450..3259

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG 23796 / Sphe3) RepID=F0M3Q4_ARTPP similarity UNIREF
DB: UNIREF100
  • Identity: 92.2
  • Coverage: 269.0
  • Bit_score: 507
  • Evalue 6.60e-141
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 92.2
  • Coverage: 269.0
  • Bit_score: 507
  • Evalue 1.90e-141
  • rbh
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:ADX73339.1}; TaxID=930171 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter phenanth similarity UNIPROT
DB: UniProtKB
  • Identity: 92.2
  • Coverage: 269.0
  • Bit_score: 507
  • Evalue 9.30e-141

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Taxonomy

Arthrobacter phenanthrenivorans → Arthrobacter → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 810
ATGACCGGTAACGACGAGCCCGAAGAGCATTCGTCCTCCGATGGCGTTCCTACTCTCAACGGGTGGGCAATGGATCAGGCCTGGCTGGCCGACGCAGACCGCGACCGCGCTGAGGAGCGATTTGACCGGCTCGCTGGTGACCGCGAACTCACGGCCGCACTTCAGGCCAGTGGTTACCGTGGCCGCAACTACGAGCTGTTCGCGAACGAGATCGCGAAGTACGGGTGGGCTGTCATCCGCGGGTGGATCTACAAGGGGCAGATTCGTGGCGAGGTGAGGCGGAAGGGTTTTGGCGCGCTGGAGGCGGAGCCTCGCCCCGGGTCGATGATCGAAGACGCCGAGAGCCTGGCGGATGAGACGGTTGTCCTGGCCCTCAGCGCGTTTCGAGACAAGGTGCTCATTCCGGGCAAGTGGGACCCCGGCAAGGGGGCATCCTTGCGCACGTTCTTTGTGGGCCAGTGCCTGTTGCAGTTCAGCAATGTCTACAAGCGGTGGCGTCGGGAAGAGCTGCGTTCTTACGCGGAGCCGCAGGCCCCGCCGCCTGACGCGGCCTGGGCTGACGACTTCGAGGAGGGCTCGTCGACGCCGGTGGCTCCTGACGCGAGCGAGGCAGCGCACATCAAGGACGAGTTGCGCCGTGCATTTGGGAGCATCAAGGATGAGCGTGTCCGCTCAGCGTTCTACCTGAGCGTGACGCATGGGTTCACGCACGCGGAGATTGGCGAGAAGCTCGGCATGACCGCGAAAGCGGTGGAGTCGGCGATCGCCCGAGCACGTCAGCAAGTACGAGAGAACCGGGAGTCCGCATGA
PROTEIN sequence
Length: 270
MTGNDEPEEHSSSDGVPTLNGWAMDQAWLADADRDRAEERFDRLAGDRELTAALQASGYRGRNYELFANEIAKYGWAVIRGWIYKGQIRGEVRRKGFGALEAEPRPGSMIEDAESLADETVVLALSAFRDKVLIPGKWDPGKGASLRTFFVGQCLLQFSNVYKRWRREELRSYAEPQAPPPDAAWADDFEEGSSTPVAPDASEAAHIKDELRRAFGSIKDERVRSAFYLSVTHGFTHAEIGEKLGMTAKAVESAIARARQQVRENRESA*