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cn_combo_scaffold_5086_12

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: comp(10298..11281)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI00036ED80A similarity UNIREF
DB: UNIREF100
  • Identity: 41.9
  • Coverage: 356.0
  • Bit_score: 262
  • Evalue 5.90e-67
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:EZP28426.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivo similarity UNIPROT
DB: UniProtKB
  • Identity: 43.3
  • Coverage: 356.0
  • Bit_score: 270
  • Evalue 4.00e-69
lipopolysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 37.5
  • Coverage: 363.0
  • Bit_score: 207
  • Evalue 6.30e-51

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Taxonomy

Microbacterium oleivorans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 984
ATGAACATCGTCTCTGCCAGCACCGACGGCCAGTTCCTCAGCATGATCCCGGCGTTGCTCGGGCACACCCCGACGCACTCTGTCGTCGTCATCCCGTTCGCGAACGGTCGCACCCAGGGCGCGATGCGGATCGACCTGCCCGACGCCGCCCAAATCGACGCAGTCGCGCGGATGGCTACCGGCGCGATGTGCAAGGTCGAGGGCGCGGACGCATTCGCCGTCGCCGTGTACACCAACGCCCCCGCCGATGCCGCGATCGCGGAACGGTTCACCCACTACGCCACCGTGTGCGGACTCCGCCTCATGGGCGCGTTCTACGTCACCGGGAACGCGTGGGGCACCATCGGCGCCGACACCGCCCCCGAGCCGCTCCCCGACACCCCCGCGGGCCTTCCCACCGTCGAGGGGGACCAGCACCACGGCGCACGCCTGCCCGACGTGGACCCCGCCGACCGCGACCTGATGCTCGCCGCGATGGTTCGCACCGACCCCGCCGACCTCGACTACGCGCGCATCCTCGACGCGGCCGAACACGCCGCCACCAGCGACACCCTCACTGACGAGGACCGCGCGATCCTCGCCGTCACCATGACCCGCCCCGCGCTCCGCGACGTCGCGCTCGTGTCGTGGGCAACGGACCGATTCACCGGCGACCGCGCCGCCGACGCACAAAACGAGTGGGAGAACGGGGCGGAGTACCCGCAGGAACTCGCCGCGATCATCTGGGGCGACGCACCCCGCCCAGACAGCACCCGCCTGACCCGCGCGCTGGACGTTGCCCGCCGTATCGCCGCGGCCGTCCCGGACGAGATCAAGCCCGGACCCCTCGCCGTGGCCGCGTGGCTGTCCTGGGCGCTCGGACGCTCCACCCACGCCGACGCATACGCCGTCCAGGCCGAGAACATCGACCCCGCACACGGATTCGCGCGCATCATCCGCCAGTTCGTCCAGGCCGGACACACCCCGATGGGTGTGTCAGATTAA
PROTEIN sequence
Length: 328
MNIVSASTDGQFLSMIPALLGHTPTHSVVVIPFANGRTQGAMRIDLPDAAQIDAVARMATGAMCKVEGADAFAVAVYTNAPADAAIAERFTHYATVCGLRLMGAFYVTGNAWGTIGADTAPEPLPDTPAGLPTVEGDQHHGARLPDVDPADRDLMLAAMVRTDPADLDYARILDAAEHAATSDTLTDEDRAILAVTMTRPALRDVALVSWATDRFTGDRAADAQNEWENGAEYPQELAAIIWGDAPRPDSTRLTRALDVARRIAAAVPDEIKPGPLAVAAWLSWALGRSTHADAYAVQAENIDPAHGFARIIRQFVQAGHTPMGVSD*