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cn_combo_scaffold_6954_1

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: comp(2..709)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002F5FD69 similarity UNIREF
DB: UNIREF100
  • Identity: 59.6
  • Coverage: 193.0
  • Bit_score: 222
  • Evalue 6.30e-55
DNA-binding HTH domain-containing proteins {ECO:0000313|EMBL:CDK00415.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp similarity UNIPROT
DB: UniProtKB
  • Identity: 57.5
  • Coverage: 200.0
  • Bit_score: 234
  • Evalue 1.30e-58
DNA-binding HTH domain-containing proteins similarity KEGG
DB: KEGG
  • Identity: 53.6
  • Coverage: 194.0
  • Bit_score: 207
  • Evalue 4.60e-51

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Taxonomy

Microbacterium sp. C448 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 708
GTGACCACGGTGAAGTGGACATCCCCTGACGGGCAGATGCCGCGGAGCACCCCGGGCGAACAGATGCCGAGGAGCGCTCCAGACGGGCAGCTGATGACACGTGCCCTGAAGGACCTCGCCGCACACACGCGCTTCCCCGTCGTCTTCGGCGGCTACGTGCACGACGGAAGCGTCCGGGTGAGCACCGTGCTCGGCAACCGCACGCGCAGTCTCGAGGGCCTCGTGGTCAAGCCCGAGCGCGGCCTCGGCGGGCGGGCGATCACCGAGCTGCGTCCGCGCATGACCCCGGACTACCGTTCGTCGCGCCAGATCACGCATGACTACGACGGGCATGTGCTCGGCGAGGGTCTCTCCACGCTGCTGGCCGTGCCGATCGTCGTCGGCGGTGCGGTGCGCGGCGTGCTGTACGGCGGCGCGTGGGCGGAGTCGAGCGTCGGCGATGTGGTGGCCGCACCGGCGTTCCGGGTGGCGCAGGAGGTCGCGACGGAACTCCGCATCCGCGACGAGGTCGAGCGCCGTGTGGCGGCCCTCCGACCCGTGACGGGAGCGGTCGCCGTCACCGCGCCCTCCGAATCGACGACGGATGCCGCGCAGCGGGAGGAACTCCGCGCCAGCTACGCGGAGCTGCGGAGCATCGTGGCGAGCGTCGACGATCCCAACTACGCCGGCACCGCCAACGGCACGCTCGTGATCACCGTCACCGCGCTC
PROTEIN sequence
Length: 236
VTTVKWTSPDGQMPRSTPGEQMPRSAPDGQLMTRALKDLAAHTRFPVVFGGYVHDGSVRVSTVLGNRTRSLEGLVVKPERGLGGRAITELRPRMTPDYRSSRQITHDYDGHVLGEGLSTLLAVPIVVGGAVRGVLYGGAWAESSVGDVVAAPAFRVAQEVATELRIRDEVERRVAALRPVTGAVAVTAPSESTTDAAQREELRASYAELRSIVASVDDPNYAGTANGTLVITVTAL