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cn_combo_scaffold_9079_6

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: comp(2962..3849)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule similarity UNIPROT
DB: UniProtKB
  • Identity: 69.7
  • Coverage: 297.0
  • Bit_score: 388
  • Evalue 1.20e-104
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003755F8C similarity UNIREF
DB: UNIREF100
  • Identity: 77.0
  • Coverage: 296.0
  • Bit_score: 421
  • Evalue 5.20e-115
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 69.0
  • Coverage: 294.0
  • Bit_score: 376
  • Evalue 7.10e-102

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Taxonomy

Microbacterium ginsengisoli → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 888
ATGACGGCCGGCGGCATCCTGCTGGTGGACAAGCCCGGCGGCATCACCAGCCACGACGTGGTAGCCCGCGCGCGCCGCGCACTCGGCACCCGCAAGGTGGGTCACGCCGGGACGCTCGACCCGATGGCCACGGGGCTGCTCGTCGTCGGCGTCGACGCGGCGACGCGCCTGCTCACCTATGTCGTCGGCCTCGGCAAGACCTACGAGGCCACCATCCGGCTGGGGCAGGCGACGACCACCGACGACGTGGACGGGGAGCAGACCGCGCAGACGGACGCCTCGTCCCTCACCGCGTCGCAGATCGAGGCCGCGCTGCAGCCCCTGCGCGGCGTGATCTCGCAGGTTCCGAGCACCTTTTCCGCGATCAAGGTCGAGGGGCGCCGGGCGTACGATCTGGCCCGGGCGGGGGAGGACGTGCACCTGAAGGCGCGCGAGGTCACCGTATCCAGACTCGACGTCGTGGCCGAACGTCGGCACGGCGTCGTCGTCGATCTCGATGTCGTCGTCGACTGCTCCAGCGGCACCTACATCCGTGCTCTCGCCCGCGATCTCGGATCGGCCCTCGGGGTCGGCGGGCATCTCACCGCCCTCCGGCGCACGCGGATCGGTCCGTTCTCCGTGTCGGATGCGGTGCGCCTGGACGACATCGGCCGGGATCGCCTCCGCCCCTCCGCGGCCGCCGCCGCCGAGGTGCTGGGCCGGTTCGACGTCACCGGGGAGGAGGCCCGAGACCTCCGTCACGGCAAGCGCCTCTCCGGAGCCGCCGAGCGTCTCCCGTCGTCTCCGATCGCCGCCGTCGACCCTGACGGTGTCCTCGTGGGCATCGTCGAGCGACGCGGAGCGGATGTGAAGAGCGTGATGAACATGCCCGAAGGAGACAGCGCATGA
PROTEIN sequence
Length: 296
MTAGGILLVDKPGGITSHDVVARARRALGTRKVGHAGTLDPMATGLLVVGVDAATRLLTYVVGLGKTYEATIRLGQATTTDDVDGEQTAQTDASSLTASQIEAALQPLRGVISQVPSTFSAIKVEGRRAYDLARAGEDVHLKAREVTVSRLDVVAERRHGVVVDLDVVVDCSSGTYIRALARDLGSALGVGGHLTALRRTRIGPFSVSDAVRLDDIGRDRLRPSAAAAAEVLGRFDVTGEEARDLRHGKRLSGAAERLPSSPIAAVDPDGVLVGIVERRGADVKSVMNMPEGDSA*