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ACD4_2_6

Organism: ACD4

near complete RP 46 / 55 MC: 12 BSCG 46 / 51 MC: 2 ASCG 0 / 38
Location: 2759..3739

Top 3 Functional Annotations

Value Algorithm Source
rpoA; DNA-directed RNA polymerase, alpha subunit/40 kD subunit similarity KEGG
DB: KEGG
  • Identity: 36.4
  • Coverage: 305.0
  • Bit_score: 184
  • Evalue 5.60e-44
rpoA: DNA-directed RNA polymerase, alpha sub (db=HMMTigr db_id=TIGR02027 from=22 to=325 evalue=2.6e-54 interpro_id=IPR011773 interpro_description=DNA-directed RNA polymerase, alpha subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.60e-54
no description (db=HMMSmart db_id=SM00662 from=22 to=230 evalue=9.1e-33 interpro_id=IPR011263 interpro_description=DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: HMMSmart
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 9.10e-33

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Taxonomy

ACD4 → Gracilibacteria → Bacteria

Sequences

DNA sequence
Length: 981
ATGCACATTATTCATAATGTTATATGAGTACCAAAAATCACTCATGAAAAAATTGGGGATTTTGAATCTAAATTTGTAGTTGCGCCTTTGCCAAGTTGATTTGGTGTAACAATCGGTAATTCTTTGAGAAGAATTATGTTATCCTCAATTCCTTGAACAAGAGTAACTTGAATTAAGGTTAAATGAATAAGCCATGAATATTCTTCAATTCCATGAATTAAAGATAGTGTTCTTGATATAATGCTAAACTTAAAAAATTTGGTTATTGATAAAAATGATACTTCTATTGAATGGATTTCATTAAAGAAAAACAAAGCTTGAGTTGTTACAGCGTGAGATATTAAATTACCCTCAAATGTAAAAATTCTTAATCCTGAATTGTATATTACTGAAATTGATAAAGATTGATTAGAATTGAATATTGATATTAGAATTGAAAAAAGAGCTGGATATTTAAGTATTGATGAATTAAAAAAGGTTGAAGAAGATGTAAATGTTTTATTGATAGACGCTAATTTTTCTCCTGTTTTGAATGTTCAATATAATGTCTTACCATTACGTTTCGGAGATATTACAAATCTTGATTCATTAGAATTGGTAATTAAAACAAACTGAATTATAACTCCTCAAGACGTACTTAGATTTTCATCTGATATGCTTAGATCTTACTTTTCATTGTTCAATGAGGAAGGATTACAAATAGAAGGTGAATTCATTGGAGATATTAAGAGACTCCTTGAAAAGGAAAAAGCTGAGATTAAAACTGAGCTTGAAAAAGAAACATATACTCCAATTGAAATAATGTGATTATCTCCAAGAACACTTAACGCATTGGTAAATTGAGATATCCTTTCTATCGAACAACTTACAAAATGCACTGAAGCAAAACTTTCATCAATCAAATGATTTTGAAAAAAAGCAATGACAGAAGTGAGAGATGCACTTAGAGAAAGATGATTTAAGCTTCTTTGAGACGATTAA
PROTEIN sequence
Length: 327
MHIIHNVIGVPKITHEKIGDFESKFVVAPLPSGFGVTIGNSLRRIMLSSIPGTRVTGIKVKGISHEYSSIPGIKDSVLDIMLNLKNLVIDKNDTSIEWISLKKNKAGVVTAGDIKLPSNVKILNPELYITEIDKDGLELNIDIRIEKRAGYLSIDELKKVEEDVNVLLIDANFSPVLNVQYNVLPLRFGDITNLDSLELVIKTNGIITPQDVLRFSSDMLRSYFSLFNEEGLQIEGEFIGDIKRLLEKEKAEIKTELEKETYTPIEIMGLSPRTLNALVNGDILSIEQLTKCTEAKLSSIKGFGKKAMTEVRDALRERGFKLLGDD*