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berkeley_reactor_200306_biofilm_scaffold_54101_18

Organism: 2019_SCN_bioreactor_200211_biofilm_Bacteroidetes_44_168

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 18290..18589

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Segetibacter koreensis RepID=UPI00037342A0 similarity UNIREF
DB: UNIREF100
  • Identity: 79.8
  • Coverage: 99.0
  • Bit_score: 167
  • Evalue 4.50e-39
Transcriptional regulator {ECO:0000313|EMBL:KIC96198.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.6
  • Coverage: 98.0
  • Bit_score: 167
  • Evalue 6.40e-39
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 74.7
  • Coverage: 99.0
  • Bit_score: 162
  • Evalue 5.40e-38

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Taxonomy

Flavihumibacter solisilvae → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 300
ATGAAAAATCCGATAGGAAATTTAAATAAAGTATTTGACAGCCGTATAAGGCTGGGTATCATGAGCTCCTTAATGGTGAACGAGGAGCTTAATTTCAACCAGTTGAAAGAAATAGTGGAAGTGACCGACGGAAATCTTGCTTCTCATCTCAAAAACCTGGAAGAGAACGGTTATATAAAAGTGCAAAAGGGCTTTATAGGCAGAAAGACGAACACAACATATATGGTAACCAAAGCAGGTGAAAAGGCATTTAAATCACATCTTGACGCACTGGAGCAAATGATACGATCCCTGGAATAG
PROTEIN sequence
Length: 100
MKNPIGNLNKVFDSRIRLGIMSSLMVNEELNFNQLKEIVEVTDGNLASHLKNLEENGYIKVQKGFIGRKTNTTYMVTKAGEKAFKSHLDALEQMIRSLE*