ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_77542_11

Organism: 2019_SCN_bioreactor_200211_biofilm_Bacteroidetes_44_168

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 13112..14053

Top 3 Functional Annotations

Value Algorithm Source
Hydroxymethylbilane synthase {ECO:0000256|SAAS:SAAS00018413}; EC=2.5.1.61 {ECO:0000256|SAAS:SAAS00018413};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.6
  • Coverage: 321.0
  • Bit_score: 377
  • Evalue 9.80e-102
Hydroxymethylbilane synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMG3_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 58.6
  • Coverage: 321.0
  • Bit_score: 377
  • Evalue 7.00e-102
hydroxymethylbilane synthase similarity KEGG
DB: KEGG
  • Identity: 58.6
  • Coverage: 321.0
  • Bit_score: 377
  • Evalue 2.00e-102

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 942
ATGACCCAGGTAGTTAAAATAGGAACCCGCGACAGTGAGCTGGCGCTATGGCAGGCCAAAAAAGTTCAGTCTCTTTTGCAAGGACGGGGAATAGAGTCTGTTCTTGTGCATATAAAAAGCGAAGGCGATATTGACCTGTCCACACCTTTATACGAGATCGGCGTTCAGGGTATTTTTACCAAAACGCTTGATATCGCGCTCCTGCAAAACCGCATTGACATAGCAGTACATTCTTTCAAGGATGTGCCCACACAGCCGGCAAAAGGGCTCATCACCGCTGCGGTGCTGAAACGAGATGCGTATACGGATATACTGGTATTCAGGGGCGACAGGGAAGATACGCTTGCGGCGCTTGACCATGGTAGTGATGGCGCTGCGCTTACCATTGCCACGAGCAGCATCCGCAGGCGGGCGCAGTGGCTGCACCGCTACCCTCATCACCGGATGGAAAATCTCCGGGGGAACGTAAATACAAGGCTGAAAAAGCTGGCAGAAAGCAACTGGCACGGCGCTATCTTTGCAGCGGCAGGGTTGGAAAGGATCGGTATAAGACCGGCGGGAAGCATTGATCTTACCTGGATGCTGCCTGCGCCTGCACAGGGAGCTGTAGCAGTTGCCTGCAGGGAAGACGATGAGCGGTTGAAACAAATATGCGCAGGCATCAATGATCATGATACGGCTGTATGTACCGGTGTGGAAAGAGATTTTCTTAGAACGTTAATGGGCGGATGCACTACGCCGATAAGTGCACTGGCAACCATAGAAAATGGAGAAGTTGTACTGAAAGGCAGCCTGCATTCCAAAGACGGCCGGCAAATGATCGGTGTGGAAAAACGTTCCGCCCTTTCCGGTGCAGCCGGTATCGGAAAAGAAGCAGGGGCAGAAGTGATGCAGCGCGGGGGAGATATAATAATTGAATCAATAAAGCATGGCGGCGAATAA
PROTEIN sequence
Length: 314
MTQVVKIGTRDSELALWQAKKVQSLLQGRGIESVLVHIKSEGDIDLSTPLYEIGVQGIFTKTLDIALLQNRIDIAVHSFKDVPTQPAKGLITAAVLKRDAYTDILVFRGDREDTLAALDHGSDGAALTIATSSIRRRAQWLHRYPHHRMENLRGNVNTRLKKLAESNWHGAIFAAAGLERIGIRPAGSIDLTWMLPAPAQGAVAVACREDDERLKQICAGINDHDTAVCTGVERDFLRTLMGGCTTPISALATIENGEVVLKGSLHSKDGRQMIGVEKRSALSGAAGIGKEAGAEVMQRGGDIIIESIKHGGE*