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berkeley_reactor_200306_biofilm_scaffold_77542_13

Organism: 2019_SCN_bioreactor_200211_biofilm_Bacteroidetes_44_168

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 14766..15806

Top 3 Functional Annotations

Value Algorithm Source
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554};; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.5
  • Coverage: 341.0
  • Bit_score: 566
  • Evalue 2.20e-158
Uroporphyrinogen decarboxylase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMG5_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 78.3
  • Coverage: 345.0
  • Bit_score: 557
  • Evalue 5.50e-156
uroporphyrinogen decarboxylase similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 345.0
  • Bit_score: 557
  • Evalue 1.50e-156

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Taxonomy

Flavihumibacter solisilvae → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1041
ATGAAAAATGATTTATTATTAAGAGCACTGAGAGGAGAAACAACGGAGCGCCCACCGGTATGGATGATGCGCCAGGCCGGGAGATACCTGCCGGAATATATGGCGCTGCGGGAGAAATACGGTTTTTTTGAACGCTGCCAGACGCCTGGGCTTGCATGTGAGATCACCCTGCAACCTGTTGATATCATTGGCGTGGATGCGGCCATCCTGTTTTCGGATATACTGGTGGTGCCGCAGGCAATGGGGCTCGAAGTGCAACTGGTAGAGTCGAAAGGTCCCGTGCTCCCTGATCCGATCAAAACAGAGCAGGATCTGCAGAGAATAACCATACCCGATGTTCACGAAAAGCTGCAATATGTTTTTGACGCCGTTTCGCTGATAAAAAAAGAACTGGACGGGAGAGTGCCGCTTATCGGCTTTGCGGGCGCACCGTGGACAATACTCTGCTATATGGTGCAGGGTAAGGGCAGCAAGACCTTTGATGAGGCCAAAGCATTTTGCTATACGCAGCCGGAGCTGGCGCACCGGCTTTTGCACATGATCACGGAAACTACCATTGCCTACCTGAAAGCGCAGATCAAAGCAGGCGCAGATACCGTGCAGATCTTTGACAGTTGGGGCGGATTGCTCGGCCCCGGAGATTTTGAAAACATCTCTTTGCAATATATCCGCAGGATAGTAACAGCGATCAACGGGGAAGTGCCGGTGATCATTTTTGCCAAAGGCGCCTGGCATTCGCTGGAGAGCATGGCGGCGACCGGCGCTGCAGGCCTCGGTATTGACTGGTGTATACGGCCGGAAATGGCAAGACAGCTTTCCGGTAATGACATAACGCTGCAGGGGAATTTTGACCCGGCAAAATTGCTGTCGCCTGTACCTGTTATAAAAAAGGAAGTGACACAAATGCTGCACGCTTTCGGCAACCGGCGGTATATAGCCAACCTGGGGCATGGTATATTACCCAATGTGCCCGTTGACCATGCAAGGGCATTTGTAGATACGGTAAAAGAATGGGAGTATGCTCCGGTAAATGCAAATTAG
PROTEIN sequence
Length: 347
MKNDLLLRALRGETTERPPVWMMRQAGRYLPEYMALREKYGFFERCQTPGLACEITLQPVDIIGVDAAILFSDILVVPQAMGLEVQLVESKGPVLPDPIKTEQDLQRITIPDVHEKLQYVFDAVSLIKKELDGRVPLIGFAGAPWTILCYMVQGKGSKTFDEAKAFCYTQPELAHRLLHMITETTIAYLKAQIKAGADTVQIFDSWGGLLGPGDFENISLQYIRRIVTAINGEVPVIIFAKGAWHSLESMAATGAAGLGIDWCIRPEMARQLSGNDITLQGNFDPAKLLSPVPVIKKEVTQMLHAFGNRRYIANLGHGILPNVPVDHARAFVDTVKEWEYAPVNAN*