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berkeley_reactor_200306_biofilm_scaffold_77542_19

Organism: 2019_SCN_bioreactor_200211_biofilm_Bacteroidetes_44_168

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 21005..21934

Top 3 Functional Annotations

Value Algorithm Source
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.9
  • Coverage: 308.0
  • Bit_score: 441
  • Evalue 9.30e-121
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL64_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 68.1
  • Coverage: 310.0
  • Bit_score: 439
  • Evalue 1.90e-120
ribosome biogenesis GTPase RsgA similarity KEGG
DB: KEGG
  • Identity: 68.1
  • Coverage: 310.0
  • Bit_score: 439
  • Evalue 5.50e-121

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Taxonomy

Flavihumibacter solisilvae → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 930
ATGAAAGGAACAGTATACAAATCAACCGGGAGCTGGTACGTAGTAAAGGACGATCAGGGAAAGACATATAATGCAAGGATAAAAGGGAAGTTCAAATTAGACGATATCACTTCTACCAACCCCGTTACGGTAGGTGATGAGATAGAAGTTGCTTCCGAAGGCGGCGACAGCAACAGCGTGATCATAACGGGCATCAGTGAACGCCGCAATTATATCAACAGGCAATCTCCTTCCAACAAATACCAGCATCATATCATTGCAGCTAATATAGACCAGGCATTGCTGATATGCACGCTTCGCGAGCCCAGGACATCGCAGGGCTTTATTGACCGCTTTCTCGTGGCTTCTGAAGCTTACCATGTTCCCGCAATATTATTATTTAATAAAAAAGACCTGTACCGGAAAAAGGAAACGCTGTTGTATGAAAGCTGGAAAGCAATGTATGAAGCGATAGGGTATAAAACAATATTGATGAGCGTTGAAAAAAGCGAAGGACTTGCAGAAGCAAAGGCAATACTGCACGACCAGACGACCCTGATCAGCGGGCATTCGGGTGTAGGGAAATCTTCTTTTATCAATGCGATCATTCCCTCCTCCGGATTGAAAACCCAGGAAGTAAGCGGCTGGAGCGGAAAGGGACTGCATACTACCACGTTTGCCGAAATGTATGACCTGCCGGGAGGAGGCAGGATCATCGATACCCCCGGCATCCGAGAATTTGGATTGGTAGATATATCACGCCGGGAACTATCGCATTATTTTCCTGAAATGCGGCCACTCATCAATGAGTGCCAGTTTAATAACTGTTTGCACGTTAACGAGCCGGGATGCGCGGTCAAATCAGCCGTTGAAAATGAAACCATTCATATAGACAGATATATAAGCTATTGTAAAATTCTTGACTCCATCAACGATAAAGCATATCAATAA
PROTEIN sequence
Length: 310
MKGTVYKSTGSWYVVKDDQGKTYNARIKGKFKLDDITSTNPVTVGDEIEVASEGGDSNSVIITGISERRNYINRQSPSNKYQHHIIAANIDQALLICTLREPRTSQGFIDRFLVASEAYHVPAILLFNKKDLYRKKETLLYESWKAMYEAIGYKTILMSVEKSEGLAEAKAILHDQTTLISGHSGVGKSSFINAIIPSSGLKTQEVSGWSGKGLHTTTFAEMYDLPGGGRIIDTPGIREFGLVDISRRELSHYFPEMRPLINECQFNNCLHVNEPGCAVKSAVENETIHIDRYISYCKILDSINDKAYQ*