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berkeley_reactor_200306_biofilm_scaffold_81192_4

Organism: 2019_SCN_bioreactor_200211_biofilm_Bacteroidetes_44_168

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(3523..7011)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor plug n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CAG4_SPHS2 similarity UNIREF
DB: UNIREF100
  • Identity: 41.9
  • Coverage: 1148.0
  • Bit_score: 907
  • Evalue 9.40e-261
TonB-dependent receptor plug similarity KEGG
DB: KEGG
  • Identity: 41.9
  • Coverage: 1148.0
  • Bit_score: 907
  • Evalue 2.70e-261
TonB-dependent receptor plug {ECO:0000313|EMBL:ADZ80934.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.9
  • Coverage: 1148.0
  • Bit_score: 907
  • Evalue 1.30e-260

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Taxonomy

Sphingobacterium sp. 21 → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3489
ATGCAATTTACTGCGCATTTGGACTGTCATTCTTTTATTCCGGGCAGTGCCAAAACCAAAACCCAAGACCTGGCGTTTCTCCCTGTGCGGCAGTTTCAGCAGGTAAAAAAAATGCTGTTGATTATGAGGCTTACAGTTATTCTTGTATTGGTGGCCTGCCTTAAGGTAAGCGCCGGCGGCTATGCCCAGCAGATCACCCTCAGGGCTAAGGACATGCCCTGTGAGTCGGTTTTCAGGGAAATCACCCGGCAAAGCGGCTACCAATTTTTCTTCAACAAAAAACTGATCCGCAATGCCCGCAATGTTTCGGTAGAGCTGAATGCCGTTCCGGTGGAAAAGGCAATTCAAATTTGTTTTGCGGATCAGCCTTTCGATTTTGCGATTATTAATAAGACAGTAGTGATCCGTAAGAAGGAGCAGCACGCTACAGTAATGCCCGATGCAACTCTTGCAACTTCTTTTTCTGCAGACATCAGTCTGAGCGGTAGGGTAACCAACACCAAGAAAGAACCGCTGGAAGGTGTGAGTGTAACGGTTAAAGGCACTCAAATGGGTACTACTACCAATGCTGACGGACGGTTTCAGTTATCTGTGCCTTCAGCCAATAATATGGAACTGGTTTTTTCTTTTGTGGGGTATACAGCACAAACGGTAAAAGCAGGAAACGGGACTGTGTTTGATATAATATTGGAGGAAGCGGTTGCTGATTTGAGTGATGTCGTAGTAGTGGGGTATGGGACGCAGGTACAGAGACGCGTTACCGGCTCAATGACAGTTATCAAATCAAAAGATATAGAGAATTTAGGTGTAGGCTCTGCTTCTGAAGCTTTAATTGGCAAAGCTCCCGGTGTTCGAATAAGCCAAACCTCCGGGCTTCCAGGTGCATCGCCATCAATCAAGGTCAGGGGAGTTGGATCAATTACTGCAGGGACTGACCCTTTGTTTGTGATAGATGGCTATCCTGTTCAAGGTATTAACTTGAGTAACTATGATCTTAATGACATTTCGTCAATAAGTGTTTTAAAAGACGCTGCTGCAGCTTCCATTTATGGAGCCAGAGCTGGTTCAGGAGTAATTTTAATTACCACTAAAAGAGGTCAGGCAGGGCCTCCCAAAGTATCTTTCCAGACTTATTATGGATTTCAAAAATTATCTAAAAAGGTAGATATGCTTACTCCCGACGAGTATGTGGAATTTGCGACAGATGCTGTAAATAATGCCTGGGCATATCTTGGACATGATCCGAATGATCCCATGGAAGATCGCCCGACTTTTTATCAGATACCTCCTTATTTTTCGGATAAAGATAATTGGGTTCGAACAGACTGGATTGATGAGATCTATCAAACAGCGCCAATGATGAATAGCCAGATATCAGTAACCGGAGGTAGCAGATCTATAAGATATAGAGTCTCAGGAAGCTTCTTTGATCAGGATGGAATTATTACAAACTCAAACTTTAAAAGATATACTTTAAGTACAAACATAGATGCTGACTTAACAAGCAATTTAAAAATTGCTATTGGAATAATTACTTCAAAGATAGATGAAAAAATGATCCCGGATGAACAACAATGGAATAATGGGGTTGTAGCTACCGCAATGAGCCTTCCTGGTTTTTTTGCAACAAGAAATGAAGATGGCAGCTATCCTTCCTTTGCTGGTATGGGCTATAACACCAGTGCTGTTAGAAATCCTATGGTCTTTATAAATGAATATAATCAAAAAGCCAGGCGTAGTAGAATATTGGGAAATACTTCACTTGAATATAATATAATAAAAAATCTCCAGTTTAAATCTCATCTTGGTTTTGAGATTTATAATAGAAGCGACAATTACTTTCAAAATAGCTACATCAATGATGTTCCTTCAATTCCTAATTATACAAGAGGAGTTATTGACGCTACCGGTAGTTTTAGTGCAAATTATTATTTTAATTGGCTCTGGGAAAACACCTTAAATTATAAGTTTAGATGGAAAAAAATGCACGACTTTGATTTTATTGTAGGTGCCACTTCTCAAAAACAAAATTCAGAAGATGCGTCAATAAGTGCGAGAAATTTTCCCGATAATATGGTGCCGACATTGAATGCCGGACAGGTATCTTCTGCATCAACGACTATGTCTGAGTGGTCATTGCTCTCTTATTTTTCAAGGATTAATTATGGGCTGATGGATAAATACTTTCTTTCATTGTCGCTGAGGGCTGATGGTTCTTCAAGATTTGGGCTGCAAAATAAGTGGGGGTACTTCCCTTCCGTTTCTGCAAGCTGGATAGCATCAGAAGAAAATTTCCTAAGAAACTCGTCAATAATAAATTATTTAAAAATCAGGGCTAGCTATGGACTTTCGGGAAACAACAATATTTCGAATTACGGTTCAATAGGAAGCCTATCTTATACGAAGTATGCAATAGGGAACAATAATATATCTGGACTGGTTCCATCGTCTTTATCTAATGCTAATCTTGGCTGGGAAGCTTCAAAACAATTGAATGTAGGCATAGATTTCGGTTTTTGGAACGACAGAATTAGAATTACCGGTGATATATATCAAACGGTAAGTAGCGGACTTTTATTGAATGTCCCGGTACCCAGCATTTTAGGAGTTACAAGCGCACTTCAAAATATTGGCAAAGTACGGAATAGGGGATTGGAAATATCTTTGACTACTCGTAATCTTACCGGAAACTTTAATTGGTCTACTGATTTCAATATTTCTTTTAATCGAAATATCGTATTACAATTGGGTCCTTCCGGAAAATCTATTATATCTACATCTTATATAGTATCCAATATCACAGAAGTTGGTAAGCCGGTTGGAAATTTTTATGGCTATATTTTTGAAGGTGTTTATAATTCCCAAGAAGAGATTGATAAGCATCCTCACCTTCCAACAGATACCCCGGGGGACCCTATTGTGAAAGATGTAAACACTGATGGGAAAATTACTCCTGATGACAGAACTATATTGGGAAATTATCAGCCGGATTTTACTTATGGACTGAATAACACTCTTCGGTATAAGGGATTCGATCTCAGTTTCTTTTTGCAAGGAGTATACGGCAATGAGGTAATGAATCTTGGAATGTATCAAACCGGTTCAATGACCGGGCGAACAAATAGTAAGGGGATGGCCAGAGACAGATGGAGATCACCGGAGAATCCCGGTAACGGAAAAGTCTTTAAAGCGAGCATTGATGTGTATGGGGTACGGAGAGATGCATCGACTTTTTTTATGGAAGATGGTTCCTATATTAGGGTGCGCGACATTACTTTAGGATATAATTTTAACTCTGATCTCCTCAAGACAATTAAGATTAGCAGTGTTAGAGTATATTTATCTTCACTCAACCCGTTTACTTTCGCTAAATATTCCGGCTATAACCCGGAAGTAAGTACATATGATAATGCGCTGACTCCAGGCATTGATTACTTTAACTATCCTTTATCTAAGAACTTAATATTAGGTATTAACATAACATTTTAA
PROTEIN sequence
Length: 1163
MQFTAHLDCHSFIPGSAKTKTQDLAFLPVRQFQQVKKMLLIMRLTVILVLVACLKVSAGGYAQQITLRAKDMPCESVFREITRQSGYQFFFNKKLIRNARNVSVELNAVPVEKAIQICFADQPFDFAIINKTVVIRKKEQHATVMPDATLATSFSADISLSGRVTNTKKEPLEGVSVTVKGTQMGTTTNADGRFQLSVPSANNMELVFSFVGYTAQTVKAGNGTVFDIILEEAVADLSDVVVVGYGTQVQRRVTGSMTVIKSKDIENLGVGSASEALIGKAPGVRISQTSGLPGASPSIKVRGVGSITAGTDPLFVIDGYPVQGINLSNYDLNDISSISVLKDAAAASIYGARAGSGVILITTKRGQAGPPKVSFQTYYGFQKLSKKVDMLTPDEYVEFATDAVNNAWAYLGHDPNDPMEDRPTFYQIPPYFSDKDNWVRTDWIDEIYQTAPMMNSQISVTGGSRSIRYRVSGSFFDQDGIITNSNFKRYTLSTNIDADLTSNLKIAIGIITSKIDEKMIPDEQQWNNGVVATAMSLPGFFATRNEDGSYPSFAGMGYNTSAVRNPMVFINEYNQKARRSRILGNTSLEYNIIKNLQFKSHLGFEIYNRSDNYFQNSYINDVPSIPNYTRGVIDATGSFSANYYFNWLWENTLNYKFRWKKMHDFDFIVGATSQKQNSEDASISARNFPDNMVPTLNAGQVSSASTTMSEWSLLSYFSRINYGLMDKYFLSLSLRADGSSRFGLQNKWGYFPSVSASWIASEENFLRNSSIINYLKIRASYGLSGNNNISNYGSIGSLSYTKYAIGNNNISGLVPSSLSNANLGWEASKQLNVGIDFGFWNDRIRITGDIYQTVSSGLLLNVPVPSILGVTSALQNIGKVRNRGLEISLTTRNLTGNFNWSTDFNISFNRNIVLQLGPSGKSIISTSYIVSNITEVGKPVGNFYGYIFEGVYNSQEEIDKHPHLPTDTPGDPIVKDVNTDGKITPDDRTILGNYQPDFTYGLNNTLRYKGFDLSFFLQGVYGNEVMNLGMYQTGSMTGRTNSKGMARDRWRSPENPGNGKVFKASIDVYGVRRDASTFFMEDGSYIRVRDITLGYNFNSDLLKTIKISSVRVYLSSLNPFTFAKYSGYNPEVSTYDNALTPGIDYFNYPLSKNLILGINITF*