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berkeley_reactor_200306_biofilm_scaffold_108872_9

Organism: 2019_SCN_bioreactor_200211_biofilm_Bacteroidetes_44_168

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 5404..9780

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
Heavy metal efflux pump, CzcA family n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y0V7_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 66.0
  • Coverage: 1464.0
  • Bit_score: 1895
  • Evalue 0.0
CzcA family heavy metal efflux pump similarity KEGG
DB: KEGG
  • Identity: 66.0
  • Coverage: 1464.0
  • Bit_score: 1895
  • Evalue 0.0
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:ACU04884.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.0
  • Coverage: 1464.0
  • Bit_score: 1895
  • Evalue 0.0

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Taxonomy

Pedobacter heparinus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 4377
ATGTTAGACAGGATTATACATTTCTCCATAAAAAATAAACTTGTAATTGGTTTTTTCGTATTGGCGTTGGTTATTTGGGGGGGGTACTCACTCTCCAGACTTCCAATTGATGCAGTGCCAGATATTACCAATAACCAGGTGCAGATCATTACACAAGCTCCAAACTTAGGAGCACAGGAAGTAGAGCAGTTCATTACAGCCCCAGTAGAATTAGCTATGGCAAACATTCCGGAAATGGTCGAAAAACGCTCCATTTCCCGTTCTGGTATATCTGTAGTCACACTTGTTTTCCACGATAACACAGACGTTTATTGGGCAAGGCAACAAGTAAGTGAAAGGCTTAAAGAAGCACAGGAAGTTATTCCTGAAGGAATGGGCAAGTTATCACTTGCCCCAATCAGCACAGGACTTGGAGAGATTTATCAATACACCGTCCATACTGAGCCAGGATATACTGATAAATATTCCCCAACAGATTTAAGAACTATTCAGGACTGGATTGTAAGAACACAGTTAGCAGGAGTGGAAGGTGTTGCAGAAGTAAGTGGCTGGGGCGGATACGTAAAACAGTACGAAGTAGCAGTTGATAACGACAGGCTCAATTCAGTGAACATCACAATACCCGAAGTGTTCACCGCTTTAGAAAACAACAATGCAAACACAGGTGGTTCATATATTGAGCAGCGCAGCAATACCTATTTCATTAGAGGCATAGGTCAGGTAAAAACCTTTACAGATATAGAGAAGATTGTTATTAAAAATGTCAGTGGAACTCCAATATTGATAAGAGACGTAGCTACAGTTCAATTTGGAAGTGCTACGAGGTACGGTGCAGTTACGCGTAACGGAGAAGGCGAAGTAGTCGCAGGTATTACACTCATGTTGAAGGGCGAAGATTTCAATAAAGTAATTGCTAATGTAAAAGAGAGGATGAAGCAAATACAAAAGTCATTGCCTGAAGGCGTAGTTATCGAACCGTTTATAGATAGGACAGAATTAGTAGGCAGAACCATCGGTACTGTAAAAAAGAACTTGCTTGAAGGGGGTTTGATTGTAGTCTTTGTACTTGTCTTATTACTTGGTAACTGGAGAGCTGGTTTGTTGGTAGCATCCGTGATACCCTTAGCAATGCTCTTTGCGTTTGCATTAATGAGAACCTTTGGAGTTTCAGGTAACTTAATGAGTTTGGGCGCTATAGATTTTGGTTTGATTGTAGATGGCGCAGTAATTATTGTTGAAGCAATAATTTTCCGGCTTACAGAGAGCAATTTATTTCCGGGAAAGCCGCGGCTTACACAGCCTGAGATGGATGCTGAAGTTTATACAGCATCGTCTAAAATCAGGAACAGTGCGGCCTTCGGAGAAATTATAATACTGATTGTATACTTACCGCTCTTTGCGTTGATAGGTGTTGAAGGCAAAATGTTTAAACCGATGGCTCAAACAGTGGCTTTCGCCATATTAGGCGCTTTCATTCTTTCGCTTACTTATGTGCCTATGATGAGTGCTTTGTTTTTGAGTAAAAGCACTGTGCATAAGAAAACCATTTCGGACAAAATAATGAATGCCTTGCACAGGGTTTATGAACCTGCTTTGCGTACCGTTTTAAAGTGGAAGATTACAACCGTTTTAATAGCATTTGTACTATTTATTATATCACTCCTTGTATTCAATAACATGGGTGGTCAGTTCATACCCACGTTGGAAGAAGGAGATTTAACTGTAGAAATTTCTATGTCACAGGGCACTTCATTAACGCAAACAGTTGATATGTTTTCAAAAGCAGAAAAGATATTGAAGAAGCAATTTCCAGAAGTAAAGCAGGTAGTAACAAGAATTGGAAGTTCTGAAATACCAACTGATCCCATGCCAATAGAAAGAGCCGACATGATGGTTGCAATGAAGCCAAAAGAAGATTGGACAAGTGCAGAGACAAAAGAAGAAATGATGGAAAAAATGGAAAAAGCTTTGTCAATATTACCAGGCATAAGAGTAGAAATAACACAACCCATGCAGATGCGTTTCAACGAGCTTCTTTCAGGTATCAGACAGGACGTGGCAATAAAAATATTCGGAGATGACATTGACATTCTTTCCCAACAGGCAAATAAGATTTCAAAACTCATAGCACCTGTAAACGGTGTAGGTGAACCATTTGTTGAAAAGGTTGCAGGCTTGCCGCAAGTGGCAGTAGAATACAACAGGGATAAGATGGCTCAATATGGTTTAAGCATCAAAGATGTAAATATGATATTGCAAACAGCTTTTGCAGGCAATGTAGCAGGTGTTGTGTTTGAAGGTGAGAAAAGGTTTGATTTGGTAGTACGTCTAAATAGGGCTTTGAGAGAAGATATAAGGAACATTGAAAACCTTTATATACCCTTGCCTTCAGGCAACAAAGTACCACTAAACCAGGTAGCAAGTATCGAGTTCAAAGATGCACCAGCACAGGTTTCAAGAGAAAATGGAAAGCGTAGGATTTATGTTGGGTTCAATGTAAGAGGAAGGGACGTTGAAAGCACTGTGGAAGATATACAAGCGAAGCTGGATAAACAATTAAAGCTACCAGTAGGCTACTACCTTACTTACGGCGGCGAATTTCAAAATTTACAGGAAGCGAAAGCAAGATTATCAATTGCAGTGCCTGTTGCATTATTGCTGATACTCGTATTGCTATTTGTAACCTTTAAATCCATTCCGCAAACATTATTAATATTTACAGCCGTTCCGCTTTCAGCAATAGGTGGCGTGTTCGCTTTGCTAATTCGGGGAATGCCATTTAGTATTTCAGCAGGTGTAGGTTTTATAGCCCTCTTTGGCGTAGCAGTATTGAACGGCATTGTGCTCATTGGTTATTTCAACCAGTTAAAGAAGGAAGGGGTTGAAGACATTAATACAAGGGTGATGGAAGGAACAAAAGTCCGGCTGCGACCCGTAATTATGACGGCTGCAGTTGCATCGCTTGGGTTTTTACCAATGGCATTGTCAACAGGTGCAGGTGCAGAAGTGCAAAAGCCTTTGGCAACAGTTGTTATTGGCGGTTTGCTTACAGCAACCCTATTAACCCTCTTTGTACTTCCGAGCCTATACGTATTAGCTTCCAAAAAGCTCAAAAGAGTAAAGATGAAAATAAAGCCAGACAAATTGCCGTTGCTGTTATTGTTCACTTGCATCTTCCAATTTGGAAAGATAAATGGACAAACTCCAAATCCTGTTTTAAGCAATCTAATTCAACAGGCCAGGATAAACAATCCGCAGCTTCGACGATCAAGTTTGGAGATACAGCAAACCCGGACACTTCAAAACACGGCTGTTGACTTACCAAAAACAACCTTCAGTATTACGCAAGACCCTACCAGTGGCGGTAATATTGATAACTCCATTGGTATTTCTCAATCCTTTTCTTTGCCCTCAGTTTACAAAACACAAAGAAAGGTTTATCAGCAACAGACGAAACTTGCAGAAGCCAACAAAAGAGTAACTGAGACGGAGATAATAAGAGATATAAAACTTTCGTACTATAACTACCTGTACACTTTTGAAAGATTGCGATTATTGAACGATTTAGATAGTATCTATACTGACTTTTTCAACAAGGCAGAAGTCAGGTACAAAGTAGGAGAAACATCAAATCTCGAAAAGCTGACAGCACAAAACCAGACATTTGAGATACGATTGCAGAAAAAAGAAGCTCTTGCAGATTTAAAAGTTTATGAAACACTTATACGGCAGCTAACAAGCATTACAGGTGAGATAGCCATTGATACCACAGACAGAACCTTTTACTATACTGAGTACATACAAATTGATACTGCAACGAGTCAGAATCCCATGTTAGTATATCAGCAGCAGAATATTGCTGTGGCATCGGCAAGGGTTAGTTTGGAAAAAACAAAATGGCTCCCTGAATTTTCTGTTGGGTATAACCATCAATACCTTTTTAAAGGATTTAATCCTGCTGATATAAATCGCTCTTACTTCCCAGGTACTCGAATAGCGGGAGTTGAATTAGGAATGTCGTTGCCACTATTCACAAAGCCATACAGAGCCAGGGTTGAAGCAGAGAAGTTAAATGTTGCTATTGCTCAGCAGGACCTTAACAGGGTTCAATGGCAGCTAACATCAGAATATCAATCTGCATTTCAGCAATATCTGAAGCATAAAGAAAGGGTTGACTACTATCAATCAGAAGGTATTAAGGTGGCTGATGAGCAAATACGGATAGCAAGGTTTGCTTTTAGCAAAGGAGAAATCAGCTACGTTGAAATGGTTCAAAATCTTACGCAGGCAATGCAGATAAAGTTGCAACACTTGCAGGCTTTGCAGCAGTTGAACGAAGCGGTAATTAATATTAAATACTTAAAAGGTCAGGAATAA
PROTEIN sequence
Length: 1459
MLDRIIHFSIKNKLVIGFFVLALVIWGGYSLSRLPIDAVPDITNNQVQIITQAPNLGAQEVEQFITAPVELAMANIPEMVEKRSISRSGISVVTLVFHDNTDVYWARQQVSERLKEAQEVIPEGMGKLSLAPISTGLGEIYQYTVHTEPGYTDKYSPTDLRTIQDWIVRTQLAGVEGVAEVSGWGGYVKQYEVAVDNDRLNSVNITIPEVFTALENNNANTGGSYIEQRSNTYFIRGIGQVKTFTDIEKIVIKNVSGTPILIRDVATVQFGSATRYGAVTRNGEGEVVAGITLMLKGEDFNKVIANVKERMKQIQKSLPEGVVIEPFIDRTELVGRTIGTVKKNLLEGGLIVVFVLVLLLGNWRAGLLVASVIPLAMLFAFALMRTFGVSGNLMSLGAIDFGLIVDGAVIIVEAIIFRLTESNLFPGKPRLTQPEMDAEVYTASSKIRNSAAFGEIIILIVYLPLFALIGVEGKMFKPMAQTVAFAILGAFILSLTYVPMMSALFLSKSTVHKKTISDKIMNALHRVYEPALRTVLKWKITTVLIAFVLFIISLLVFNNMGGQFIPTLEEGDLTVEISMSQGTSLTQTVDMFSKAEKILKKQFPEVKQVVTRIGSSEIPTDPMPIERADMMVAMKPKEDWTSAETKEEMMEKMEKALSILPGIRVEITQPMQMRFNELLSGIRQDVAIKIFGDDIDILSQQANKISKLIAPVNGVGEPFVEKVAGLPQVAVEYNRDKMAQYGLSIKDVNMILQTAFAGNVAGVVFEGEKRFDLVVRLNRALREDIRNIENLYIPLPSGNKVPLNQVASIEFKDAPAQVSRENGKRRIYVGFNVRGRDVESTVEDIQAKLDKQLKLPVGYYLTYGGEFQNLQEAKARLSIAVPVALLLILVLLFVTFKSIPQTLLIFTAVPLSAIGGVFALLIRGMPFSISAGVGFIALFGVAVLNGIVLIGYFNQLKKEGVEDINTRVMEGTKVRLRPVIMTAAVASLGFLPMALSTGAGAEVQKPLATVVIGGLLTATLLTLFVLPSLYVLASKKLKRVKMKIKPDKLPLLLLFTCIFQFGKINGQTPNPVLSNLIQQARINNPQLRRSSLEIQQTRTLQNTAVDLPKTTFSITQDPTSGGNIDNSIGISQSFSLPSVYKTQRKVYQQQTKLAEANKRVTETEIIRDIKLSYYNYLYTFERLRLLNDLDSIYTDFFNKAEVRYKVGETSNLEKLTAQNQTFEIRLQKKEALADLKVYETLIRQLTSITGEIAIDTTDRTFYYTEYIQIDTATSQNPMLVYQQQNIAVASARVSLEKTKWLPEFSVGYNHQYLFKGFNPADINRSYFPGTRIAGVELGMSLPLFTKPYRARVEAEKLNVAIAQQDLNRVQWQLTSEYQSAFQQYLKHKERVDYYQSEGIKVADEQIRIARFAFSKGEISYVEMVQNLTQAMQIKLQHLQALQQLNEAVINIKYLKGQE*