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berkeley_reactor_200306_biofilm_scaffold_5351_3

Organism: 2019_SCN_bioreactor_200211_biofilm_Sphingobacteriia_51_13

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(3856..5169)

Top 3 Functional Annotations

Value Algorithm Source
GTPase Der n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPC1_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 80.2
  • Coverage: 439.0
  • Bit_score: 715
  • Evalue 2.60e-203
GTP-binding protein engA similarity KEGG
DB: KEGG
  • Identity: 80.2
  • Coverage: 439.0
  • Bit_score: 715
  • Evalue 7.30e-204
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.2
  • Coverage: 439.0
  • Bit_score: 715
  • Evalue 3.60e-203

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1314
ATGAGCGGATTTACAGTGGCCATTGTCGGCCGGCCTAATGTGGGAAAAAGTACTTTCTTCAACCGTCTGCTGGAGCAGCGGAAGGCGATAGTGGATGACGTCAGTGGTGTGACGCGTGACCGCCAGTATGGCGTTGCAGACTGGGCCGGTAAATCCTTCAACCTGATCGACACAGGCGGATTTGTCCCTGACAGTGAAGATGTTTTTGAAAAAGAGATCCGCAAACAGGTGTTGATAGCGCTGGAAGAAGCAAACGCATTGATCTTTATGGTGGATGCCGCTACGGGGATCACCAACCTGGACGAGGCGATGGCGGATGTGCTGCGCAGGAGCACCAAACCCGTATTCCTGGCAGTGAACAAGGTGGACAACAGCGACAGACTACTGGAGGCGACTGAATTTTATAGCCTTGGTTTTGACAGTATCTTTTTCCTTTCTTCCATGACCGGTAGCGGTACAGGCGAATTGCTGGATGAGATTGTCGCTCTTATACAAGACGACCAGGCGGATGCTGAAAAGACGGACCTGCCCAAGTTTGCCATCATCGGTCAGCCCAATGTAGGCAAATCGTCTTTGCTGAACGCGCTTATCGGGCAGGAGCGTACCATCGTCAGTGATATTGCCGGTACTACAAGGGATACTATCCATACCCGCTATAATCTATTCCAAAAGGATTTTGTTCTCATCGATACGGCGGGTATTCGCCGCAAGACCAAGGTGCACGAGGACCTCGAGTTCTATAGTGTCATCCGGGCCATCAAAGCCATGGACGAGGCGGATGTCTGCCTGTTATTGCTGGATGCATCCCGAGGAATCACGGCCCAGGACCTGAATATTTTCAGCCTGGCGGTGAAGAAGGGGAAGGGTGTTGTCGTCCTGGTGAATAAATGGGATCTTGTTCCGCAAAAGGAGACCAATACGGCCAAGAATTATGAGAAGGAGCTGAAAGATCGTCTTGCTCCCTTTACGGACCTGCCCATCATTTTTATTTCCGTGGTGGAGAAGATGCGTATTTTCAGGGCTATCGAGGCTGCGCTGGAGGTGTATGAGAATCGCCAGCGCAGAGTACCTACTGCTGAACTTAATGATGTGATGCTGAAGGCGGTGGAAGCCTATCATGCACCTGTTATCCGTGGGCATCCGTTGAAGATAAAGTATATTACGCAGCTGCCTACGCTGGTGCCTTCATTCGCCTTTTTTTGCAATTTCCCCGAGGATGTCAAGCAGCCGTATAAGAACTACCTGGAGAATAAGCTCAGGGAAAGCTTTAATTTCAAGGGCGTGCCTTTGCGCTTGTTTTTCCGGAAGAAATAG
PROTEIN sequence
Length: 438
MSGFTVAIVGRPNVGKSTFFNRLLEQRKAIVDDVSGVTRDRQYGVADWAGKSFNLIDTGGFVPDSEDVFEKEIRKQVLIALEEANALIFMVDAATGITNLDEAMADVLRRSTKPVFLAVNKVDNSDRLLEATEFYSLGFDSIFFLSSMTGSGTGELLDEIVALIQDDQADAEKTDLPKFAIIGQPNVGKSSLLNALIGQERTIVSDIAGTTRDTIHTRYNLFQKDFVLIDTAGIRRKTKVHEDLEFYSVIRAIKAMDEADVCLLLLDASRGITAQDLNIFSLAVKKGKGVVVLVNKWDLVPQKETNTAKNYEKELKDRLAPFTDLPIIFISVVEKMRIFRAIEAALEVYENRQRRVPTAELNDVMLKAVEAYHAPVIRGHPLKIKYITQLPTLVPSFAFFCNFPEDVKQPYKNYLENKLRESFNFKGVPLRLFFRKK*