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berkeley_reactor_200306_biofilm_scaffold_5351_13

Organism: 2019_SCN_bioreactor_200211_biofilm_Sphingobacteriia_51_13

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(16153..17145)

Top 3 Functional Annotations

Value Algorithm Source
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.9
  • Coverage: 327.0
  • Bit_score: 486
  • Evalue 2.70e-134
D-alanine--D-alanine ligase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPB0_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 70.1
  • Coverage: 328.0
  • Bit_score: 473
  • Evalue 1.30e-130
D-alanine--D-alanine ligase similarity KEGG
DB: KEGG
  • Identity: 70.1
  • Coverage: 328.0
  • Bit_score: 473
  • Evalue 3.70e-131

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 993
ATGAAGCCCACTATTGCTTTTGTCACCGGAGGGTATTCCGGTGAGTCTGTCATATCCTATAAAAGCGCGGTTACCATCGAAAATAATATTGATAAAGATCGATATATCGTCTACAAGATCGATATTACCCGGGAAGGCTGGTTCTATACCGGCGAGGATGGGGGGAAGGTCTCTGTAGATAAAAATGATTTTTCCCTGACCCTTGGTGGCCGGAAGATAACATTTGATGCCGTGCTGATCGGTATCCATGGTACGCCCGGCGAGGATGGGAAGCTGCAAGGTTATTTTGATATGCTGGGTTTGCCGTATACCAGCTGTAATGCGGCTACTTCTGCTATTACATTCAATAAAAGATTTACGGTGAGCGTTGCTGCTTTTGGCGGCATCCATGTGGCGAAATCGGTACACCTGGTGAAAGGCAGGTTCGGCAATCCCGATGAGGTAGCACGGCATTTGCAGTTCCCTGTCTTTGTGAAACCTGCCAATGGGGGGTCCAGCATCGGTATGTCCAAGGTCAATTCTCCATCGGAAGAGCTGGGTGCTGCCATCGAGAAAGCGTTTAAGGAAGATGACCAGGTGCTGATAGAAGAATTCATAACAGGCAGGGAGTTTACGGTGGGCGTCTTTCGTGCCAGGGGGGAGATCATTGTTCTTCCTCTCACCGAAGTGAGAAGCAAAAAGGAGTTTTTTGATTTTGAAGCGAAATATACAGCGGGTCTGAATGAGGAAACTACTCCCGCCCAGGTGGATGAGGCCATTGCGGAAAAAGTCAGAGCGGCAGCGAGGAAGATCTACCAGATCTTCAACTGCAGCGGTATCATCCGGATAGATTTTATCTATAACGAGGCCAAGGGTGAGCCCTTTATGCTGGAAGTGAATACGGTCCCCGGACAGAGCGCGGCCAGCATTGTCCCTCAGCAGGTGAGGACCTATGGATGGACCCTGCAGGATTTTTATTCGGCGCTTATCGAGGAGGCGCTGACCGGCCATTGA
PROTEIN sequence
Length: 331
MKPTIAFVTGGYSGESVISYKSAVTIENNIDKDRYIVYKIDITREGWFYTGEDGGKVSVDKNDFSLTLGGRKITFDAVLIGIHGTPGEDGKLQGYFDMLGLPYTSCNAATSAITFNKRFTVSVAAFGGIHVAKSVHLVKGRFGNPDEVARHLQFPVFVKPANGGSSIGMSKVNSPSEELGAAIEKAFKEDDQVLIEEFITGREFTVGVFRARGEIIVLPLTEVRSKKEFFDFEAKYTAGLNEETTPAQVDEAIAEKVRAAARKIYQIFNCSGIIRIDFIYNEAKGEPFMLEVNTVPGQSAASIVPQQVRTYGWTLQDFYSALIEEALTGH*