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berkeley_reactor_200306_biofilm_scaffold_5351_18

Organism: 2019_SCN_bioreactor_200211_biofilm_Sphingobacteriia_51_13

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(21925..23202)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000368BC77 similarity UNIREF
DB: UNIREF100
  • Identity: 55.3
  • Coverage: 427.0
  • Bit_score: 501
  • Evalue 5.70e-139
Putative glycosidase {ECO:0000313|EMBL:GAO45705.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.0
  • Coverage: 422.0
  • Bit_score: 534
  • Evalue 1.10e-148
1,4-alpha-glucan branching protein similarity KEGG
DB: KEGG
  • Identity: 52.6
  • Coverage: 428.0
  • Bit_score: 475
  • Evalue 1.20e-131

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Taxonomy

Flavihumibacter petaseus → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1278
ATGAGTGTATCCTTTCAACGTGCAGGATGGATCAGCGATTCCAATATCTATGAAGTAAACCTGCGACAATATACCCCTGCGGGGTCATTTAATGCCTTTGCACGCGAAATACCCCGTCTGAAAGACATGGGGATCGAGATCCTCTGGTTCATGCCTATTACTCCCATCAGTCACGATAAACGCAAAGGCAGCCTGGGCAGCTATTATGCCTGCAGTGACTACCTGTCGGTCAATCCGGAGTTTGGAACCCTGGATGATTTCAAGGGCCTGGTCAGGCAGGCGCACGGGCTGGGTATGCGTGTGATCATCGACTGGGTGGCAAATCATACGGGATGGGATCACCGGTGGACCCGGGAACATCCGGAATATTACCGGAAGAACCAGGACGGTCATTTTTTTGAAGCGCATGGGTGGGACGATGTCATCGATCTGAACTATGACAATAAAGAGCTGCGCCGTGCGATGATCGATGCTATGTCCTACTGGCTGCGGGAATGCGATCTGGACGGTTTCCGCTGCGATATGGCCATGCTGGTGCCACTGGATTTCTGGAAGGAAGCGAGGACGGAACTGGACGGGCAGAAGAAGGATCTTTTTTGGCTGGCAGAGTGCGAGGAGATCGCTTATCATGAAGCCTTTGATGCCACCTATACCTGGAAATTCCTTCACAAGATGGAGTCGGTCTGGCGTCGTGAGTCAGGAGTGGATGGATTGGATGAAGTATTGTCCTGGTACAATTCCATGTTCCCGCCGGATGCGATCCGCGTGTACTTTACATCCAACCATGATGAGAACTCCCATAGCGGCAGTGAATATGAGCGGATGGGTGATATGGCTAAACCGTTTGCGGTACTATGTGCTACATTGAATGGAATGCCCATGATCTACAGCGGACAGGAATTGCCGAACCATAAGCGATTGTTATTTTTCGATAAGGATGAGATCCCCTGGACGGGGGAATGTGCGCTTCATTCTTTCTACAAGACGCTGTTGGGGCTTCGGAAGCGTAATCCTGCGCTGAGAGGTGGCGATCCGGCCGTTGTTACCCGGCGTATCGGTACGCACGAAGGGTGGCGTTTTTTTGGGTTCGTACGTTCTCTGGGTGAGCATGTCGCGGTCGTGCTGCTGAACTTTTCGGGTGAGCTTTTGTCGGTGCCAGCCGGTGATCTGGGTGTGAGTAGGGGCTTCCGTGAGGTATTTACGGGTGCAGAGACGGATTTGGCCACCGGACAGTTGACATTGGGACCGTGGGGGTATCAGGTGTTGGAGAGGATATAG
PROTEIN sequence
Length: 426
MSVSFQRAGWISDSNIYEVNLRQYTPAGSFNAFAREIPRLKDMGIEILWFMPITPISHDKRKGSLGSYYACSDYLSVNPEFGTLDDFKGLVRQAHGLGMRVIIDWVANHTGWDHRWTREHPEYYRKNQDGHFFEAHGWDDVIDLNYDNKELRRAMIDAMSYWLRECDLDGFRCDMAMLVPLDFWKEARTELDGQKKDLFWLAECEEIAYHEAFDATYTWKFLHKMESVWRRESGVDGLDEVLSWYNSMFPPDAIRVYFTSNHDENSHSGSEYERMGDMAKPFAVLCATLNGMPMIYSGQELPNHKRLLFFDKDEIPWTGECALHSFYKTLLGLRKRNPALRGGDPAVVTRRIGTHEGWRFFGFVRSLGEHVAVVLLNFSGELLSVPAGDLGVSRGFREVFTGAETDLATGQLTLGPWGYQVLERI*