ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_5351_27

Organism: 2019_SCN_bioreactor_200211_biofilm_Sphingobacteriia_51_13

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 31842..32774

Top 3 Functional Annotations

Value Algorithm Source
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.5
  • Coverage: 309.0
  • Bit_score: 582
  • Evalue 3.40e-163
Malate dehydrogenase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP96_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 94.5
  • Coverage: 309.0
  • Bit_score: 582
  • Evalue 2.40e-163
malate dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 94.5
  • Coverage: 309.0
  • Bit_score: 582
  • Evalue 6.90e-164

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 933
ATGATGAAAGTTACGGTTGTAGGTGCAGGAGCCGTTGGCGCTACCTGTGCTGATAATATCGCCCGTGCAGCATTGGCCGAAGAACTGGTGCTGTTGGACATCAAGGAAGGCTTAGCCGAAGGAAAGGCCCAGGACATGATGCAGACTGCCGCCCTGCTGGGTTTCGATACCCGCATCACAGGCAGCACGAATGATTATTCCAGGACGGCTAACTCCGACGTGGTGGTCATCACTTCCGGCCTGCCCCGCAAACCCGGTATGACCCGTGAAGAGCTCATCGGCACCAATGCAGGCATCGTAAAAGGCGTGGCTGAGAATATCCTCAAATATTCTCCGAACGCGATCATCATTATCATCAGTAACCCGATGGATACGATGACCTACCTGGCCCTCACGTCCACGGGTCTTCCGAAAAATCGTATCATCGGCATGGGTGGTACGCTCGATAGCGCCCGCTTCAAATATCAGCTGAGCCAACACCTGGGCTGCAGCCCTGCTGACCTCAATGCCGTCGTTGTAGGCGGTCACGGTGATACCACCATGATCCCCCTCATCCGCCTGGCTACCTGGAACAGCGCTCCCGTGACAAAATTCCTCTCCGAAGAAAAGCAAAAGCAGATAGTTGCCGACACGATGGTAGGCGGCGCTACCCTGACCAAGCTCATCGGAACTTCCGCCTGGTATGCTCCCGGTGCTGCCGGTGCTGCACTTGTCAAAAGCATCCTGCGCGATGAAAAGAAGTTGTTTACCTGCTGCGTTTCCCTAAATGGAGAATACGGCCAGAAAGACATCTGTCTGGGCGTACCCGTTGTCATCGGCCGCAGCGGCTGGGAGAAGATCCTCGACTTCGGTCTCAACGCCGACGAGCAGGCCCTCTTCAACAAGAGCGCTGACGCCGTCCGCAGTATGAACGATGTACTCAAGACATTATAA
PROTEIN sequence
Length: 311
MMKVTVVGAGAVGATCADNIARAALAEELVLLDIKEGLAEGKAQDMMQTAALLGFDTRITGSTNDYSRTANSDVVVITSGLPRKPGMTREELIGTNAGIVKGVAENILKYSPNAIIIIISNPMDTMTYLALTSTGLPKNRIIGMGGTLDSARFKYQLSQHLGCSPADLNAVVVGGHGDTTMIPLIRLATWNSAPVTKFLSEEKQKQIVADTMVGGATLTKLIGTSAWYAPGAAGAALVKSILRDEKKLFTCCVSLNGEYGQKDICLGVPVVIGRSGWEKILDFGLNADEQALFNKSADAVRSMNDVLKTL*