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berkeley_reactor_200306_biofilm_scaffold_14321_3

Organism: 2019_SCN_bioreactor_200211_biofilm_Sphingobacteriia_51_13

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 919..1650

Top 3 Functional Annotations

Value Algorithm Source
AraC family transcriptional regulator n=1 Tax=Segetibacter koreensis RepID=UPI000367D6E2 similarity UNIREF
DB: UNIREF100
  • Identity: 72.7
  • Coverage: 238.0
  • Bit_score: 367
  • Evalue 9.60e-99
transcriptional regulator, AraC family with amidase-like domain similarity KEGG
DB: KEGG
  • Identity: 70.5
  • Coverage: 241.0
  • Bit_score: 360
  • Evalue 2.50e-97
Transcriptional regulator, AraC family with amidase-like domain {ECO:0000313|EMBL:AEW01435.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.5
  • Coverage: 241.0
  • Bit_score: 360
  • Evalue 1.30e-96

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 732
ATGATCTCGATCGATTTCAAAAAAGCCATCAGTGAAAATGCGCCTTATAATGATTGGTTGATAAACCAGTATCACCATGGTGCAGAGATCGTTTGTCTTTGTGTAGGCTCTTTCTATCTCGCCTCCACTGGTCTTTTAGACGGCAGGAAATGCGCGGTCCACTGGGCTGCCCGAAATGAGTTCAGGGAAATGTTTCCCCTTATCAACCTTATTGACGATATGATCATTACGGATGAAAGAGGTATTTATACCTGTGGAGGCGGATATTCCTACCTGAACCTGTTATTGTACATCCTGGAAAAGCATTTGGGACGGGATATCTCTGTTCTGGCGTCGAAGATGTTCGAAATAGACATAGAAAGAAAGACCCAGAACCCCTATATCATCTTTATAGGTCAGAAAAAGTATGGCGATGCGTTGGTATTGACAGCCCAGGAGAGCATCGAACGGGATCCGACGGCGTCCTTTACCGTCGATGGCATTTGCCAAAGCCTCCATATAGGCCGGCGAACCTTTGAAAGACGGTTTAAGAAATGTACAGGTAATTCAATAGTGGAATACATACAAAGAGTAAAGGTAGAATACGCCAGGAAGCACCTGGAAGGCGGTAGAAAATCGATCAATGAGATCATCTATGAGACGGGCTATAACGACGTCGATGCCTTCCGTAAGATATTCCGTCGAATAACCCACCTGTCTCCTGCTGAATATCGTAAGAAGTATGCATCGTGA
PROTEIN sequence
Length: 244
MISIDFKKAISENAPYNDWLINQYHHGAEIVCLCVGSFYLASTGLLDGRKCAVHWAARNEFREMFPLINLIDDMIITDERGIYTCGGGYSYLNLLLYILEKHLGRDISVLASKMFEIDIERKTQNPYIIFIGQKKYGDALVLTAQESIERDPTASFTVDGICQSLHIGRRTFERRFKKCTGNSIVEYIQRVKVEYARKHLEGGRKSINEIIYETGYNDVDAFRKIFRRITHLSPAEYRKKYAS*