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berkeley_reactor_200306_biofilm_scaffold_14321_5

Organism: 2019_SCN_bioreactor_200211_biofilm_Sphingobacteriia_51_13

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 3136..3564

Top 3 Functional Annotations

Value Algorithm Source
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0G2E1_ECHVK similarity UNIREF
DB: UNIREF100
  • Identity: 42.7
  • Coverage: 117.0
  • Bit_score: 112
  • Evalue 3.30e-22
response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain similarity KEGG
DB: KEGG
  • Identity: 42.7
  • Coverage: 117.0
  • Bit_score: 112
  • Evalue 9.20e-23
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain {ECO:0000313|EMBL:AGA79483.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.7
  • Coverage: 117.0
  • Bit_score: 112
  • Evalue 4.60e-22

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Taxonomy

Echinicola vietnamensis → Echinicola → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 429
ATGAATCACTCATTATCATCCAATATACGCATCGGCGCCTACGATATGGATGCAGAGCAGGTAATGAAGATCAGCATGATCATATCTCAGTATATCAATACATACCAGCCCTATCTGCGACCGGGTTATACGCTGAAAGATCTGGCCCTGGACACCGAACTTCCGTTGCACCATGTATCCGCGTTCATTAATCAATATTATGGGATGCATTTCAACGATTTTATCAATCGTTACCGTGTACGCCATTTTAAAGAAAGGATCGAGAATGAAGCATGGAAGTCGAAAAAGCTCGAAGCGATAGCGGAGGAATCAGGCTTTAATAACCGGAACACATTTGCGATAGCATTCAAAAAAGTGTATGGCCTGAAACCTTCAGAATATTTGAAAAAGGTTCGAATGATCAATGGTGTGAAAGCGTACGCAAACTAA
PROTEIN sequence
Length: 143
MNHSLSSNIRIGAYDMDAEQVMKISMIISQYINTYQPYLRPGYTLKDLALDTELPLHHVSAFINQYYGMHFNDFINRYRVRHFKERIENEAWKSKKLEAIAEESGFNNRNTFAIAFKKVYGLKPSEYLKKVRMINGVKAYAN*