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berkeley_reactor_200306_biofilm_scaffold_14321_26

Organism: 2019_SCN_bioreactor_200211_biofilm_Sphingobacteriia_51_13

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(21098..21532)

Top 3 Functional Annotations

Value Algorithm Source
Response regulator receiver protein n=1 Tax=Flavobacterium sp. F52 RepID=J1KPM7_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 48.0
  • Coverage: 125.0
  • Bit_score: 125
  • Evalue 2.90e-26
Response regulator receiver protein {ECO:0000313|EMBL:EJF99760.1}; TaxID=1202532 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. F52.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.0
  • Coverage: 125.0
  • Bit_score: 125
  • Evalue 4.00e-26
cheY; two-component response regulator, cheY-like similarity KEGG
DB: KEGG
  • Identity: 47.2
  • Coverage: 144.0
  • Bit_score: 119
  • Evalue 5.80e-25

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Taxonomy

Flavobacterium sp. F52 → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 435
ATGCTGGTAGACGATGATATGGATGATACGGAACTGTTTACGGAGGCTGTCGGATCTGTAGACGCCACTGTCAGCTGTCTGAATGCTTTCGATGGAAAAGAAGCGCTCGCGAAATTGTATAATAGGGCAGGCAGCAAGCCGGACCTGATCTTCCTGGATATCAATATGCCCATTATGAATGGCTGGCAGTTCTTATCCCATTTGAAAGATGATGAGATATTGAAGGAGATCCCCGTGATCATGTATTCCACTTCTTCAAAAATGACGGACTTCAGGGCAGCATTGGATTCCGGCGCCCTTTGTTTTTTTACAAAACCTGATAGTTTTATCACATTAAAGAATATCCTGCGTATTGTGCTGGAGCATCTGAACAATGACGATCTCGACAAAGTGTGCGATGCCATCCACCAGTCTTATAAGGCAAGAAGGAATTAG
PROTEIN sequence
Length: 145
MLVDDDMDDTELFTEAVGSVDATVSCLNAFDGKEALAKLYNRAGSKPDLIFLDINMPIMNGWQFLSHLKDDEILKEIPVIMYSTSSKMTDFRAALDSGALCFFTKPDSFITLKNILRIVLEHLNNDDLDKVCDAIHQSYKARRN*