ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_29726_1

Organism: 2019_SCN_bioreactor_200211_biofilm_Sphingobacteriia_51_13

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 292..1140

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Pseudomonas chlororaphis O6 RepID=I4XUU9_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 34.0
  • Coverage: 259.0
  • Bit_score: 133
  • Evalue 2.10e-28
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 34.0
  • Coverage: 259.0
  • Bit_score: 132
  • Evalue 1.30e-28
Uncharacterized protein {ECO:0000313|EMBL:AIC20010.1}; TaxID=587753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas chlororaphis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.7
  • Coverage: 255.0
  • Bit_score: 132
  • Evalue 6.50e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas chlororaphis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 849
ATGCGCTTAGCCAATAAGATCATTGTCAACGCCGATGACTTCGGGTACACCGACGTCGTGAATGGCGCCATCCTTCGTAGTTTCCAACGCTTTTTGATCACCAATACCAGCCTGCTTGTAAATATGCAGGGATTTGACAATGCTGCGCATCTCGTTCAGGAGCATGAAGTGCTGGCGGGACGGGTAGGTGTGCGGCTCAATTTCTCCCAGGGCTATTCGTTGACATCAGGCATACGGACCTGTCCACATTTCTGTAACAAGGGTGGCTATTTAAGCTTACGCAGCAGCCGCCGGATCCTGTTCCTTACCCGTCATGAGAAGCAGGCTGTCTATGCGGAAATGAAGGCCCAGCTGGAAAAGGCGTTGATGGCCGGCATCCAGCCGAGTCACCTGGACACCCGTCATTCCATGCATTTACAATACCCCATGGCAGCCGCGCTGGCCAGGCTGGGCAAGGAATACGGCATCCCCCGCATGAGGTTCTTCCATAACCTGGGGCCGCAAATGCGTGGGGTGAAAGGCGCCTGCAGACAGCTGTTCAACAAATGGGCCCGGCGGTCCCTGGGGGTATCGGTCCCCGATCTGTCAGGTAAAGTGGATGACCTCCTCAGCCTGCCGGATAAACGGAAGCCCGAAGGAAAGTTTATAGAAATAACAGTGGCGCCCACCGTCGATGCTTATGGGGAGCTGGTGGATCGCAATGGCAAAGCCCTCCAGGCCAGGCTGCGTCCCGTCCTCGACCATCGTCATACCTTGTCCTATGCGGACCTGCCCCTGCCTGCTGTACAGACGGGGCGTAGATTCAGACTGGAAAACCCGCTGCCGGATCTCGGGATGGACCACAGCTAA
PROTEIN sequence
Length: 283
MRLANKIIVNADDFGYTDVVNGAILRSFQRFLITNTSLLVNMQGFDNAAHLVQEHEVLAGRVGVRLNFSQGYSLTSGIRTCPHFCNKGGYLSLRSSRRILFLTRHEKQAVYAEMKAQLEKALMAGIQPSHLDTRHSMHLQYPMAAALARLGKEYGIPRMRFFHNLGPQMRGVKGACRQLFNKWARRSLGVSVPDLSGKVDDLLSLPDKRKPEGKFIEITVAPTVDAYGELVDRNGKALQARLRPVLDHRHTLSYADLPLPAVQTGRRFRLENPLPDLGMDHS*