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berkeley_reactor_200306_biofilm_scaffold_29726_4

Organism: 2019_SCN_bioreactor_200211_biofilm_Sphingobacteriia_51_13

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 4519..4950

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BRY8_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 65.7
  • Coverage: 140.0
  • Bit_score: 186
  • Evalue 1.00e-44
Uncharacterized protein {ECO:0000313|EMBL:ERM80668.1}; TaxID=1123057 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Rhodonellum.;" source="Rhodonellum psychrophilum GCM71 = DSM 17998.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.7
  • Coverage: 140.0
  • Bit_score: 186
  • Evalue 1.50e-44
response regulator receiver protein similarity KEGG
DB: KEGG
  • Identity: 56.4
  • Coverage: 140.0
  • Bit_score: 176
  • Evalue 5.20e-42

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Taxonomy

Rhodonellum psychrophilum → Rhodonellum → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 432
ATGCAAGAAATCCACATTTTACTGGTAGACGACAATGAAGGAGACGTATTGCTCACCAGGGAGGCGCTGGAAGAAGCCCGGATCATCAGCCGCATCTCTGTCGCTTATGATGGTATACAAGCCCTCAATTTCCTGCGAAAGGAACACCCTTATCGTGACGAGGAAACGCCCGATCTCATTTTACTTGACATCAACCTCCCCCGGATGGATGGCACTGAAGTGCTCAGCATCATCAAGTCGGACCCGTTGCTGAAGCGCATTCCTGTGATCATGCTGACCACCTCCTCGTCCGAGAAGGATATTATGACGTCCTATAACAACTACGCCAATTGCTATATAACGAAGCCTGTCGACCTGGAGCGTTTTATGGATGTGGTAAGGACCATCGAGGATTTCTGGATCAGCATTGTCAAACTTCCAAAAACGGCGTAA
PROTEIN sequence
Length: 144
MQEIHILLVDDNEGDVLLTREALEEARIISRISVAYDGIQALNFLRKEHPYRDEETPDLILLDINLPRMDGTEVLSIIKSDPLLKRIPVIMLTTSSSEKDIMTSYNNYANCYITKPVDLERFMDVVRTIEDFWISIVKLPKTA*