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berkeley_reactor_200306_biofilm_scaffold_29726_21

Organism: 2019_SCN_bioreactor_200211_biofilm_Sphingobacteriia_51_13

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(30849..32192)

Top 3 Functional Annotations

Value Algorithm Source
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.4
  • Coverage: 448.0
  • Bit_score: 574
  • Evalue 1.00e-160
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQG6_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 65.4
  • Coverage: 448.0
  • Bit_score: 574
  • Evalue 7.30e-161
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase similarity KEGG
DB: KEGG
  • Identity: 65.4
  • Coverage: 448.0
  • Bit_score: 574
  • Evalue 2.10e-161

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1344
ATGACTATCGCCGAACTTTACCAACTTTTCCTGCAATACCCGTCCGTGCAGACAGACACCCGTAAGCTCCGCCAGGGAGACATCTTTTTTGCTTTAAAGGGGCCTAATTTTAATGGGAATGGGTTTGCGCCCAAAGCGCTGGAGCAGGGCGCGGCGTATGCGGTGATCGACGAGCCGGTGAGCGAGGTCACGTCATCCGGACAAACCGGCCCGAATCCCTCCGACCGCCTGATCCTCGTAGACGACGTCCTCACCACCCTCCAACAGCTGGCCCTCCATCACCGCCGGCAATTCAATATTCCCTTTATCGCCATCACCGGCAGCAATGGCAAGACCACAACAAAAGAGCTGATACACACGGTGCTGGCCTCCACCTTTACAACATACACCACACAGGGCAACCTGAACAACCATATCGGCATCCCCCTCACCATCCTGTCCGTCAAAAAAGATGCACAGTTTGCCGTCATCGAGATGGGCGCCAATCACCAGAAGGAGATCGAAGGCTACTGCAAATACACCCTCCCTACCCATGGGATCATTACCAACGCTGGTAAGGCGCACCTGGAGGGGTTTGGGGGACCGGAGGGCGTGAAAAAAGGGAAAGGGGAATTATACGATTTTCTGCGGGCCACAGGCGGCACCGCCTTTGTCATGTGGGACTATGACTATCTCCGCATGATGAGCCAGGGGATACCGCATGTTATAACATATGGTACGAAGGATGCCGATGTGATGGGCCAGGCAAAAACTTCTGACTCAAACTCCTTCCTTACGGTGGACATCACATCCGGCGCTAAGACCGGCACCATCCGCACCCAGCTAGTGGGCGATTACAACCTTCCCAATGTACTGGTAGCCGTCACCGTCGGTCATCATTTCGGCGTGACAGACGACTTTATCAGGAATGCCATCGAGTCATATACCCCTTCTAACAGCCGCAGTCAGTTGATGCAAAAGGATGGCAACCATATTATATTGGACGCCTACAATGCGAACCCCTCCAGCATGCGGGCGGCCATCGAAAATTTTGCAAAAATGGTACCGGCAGGCATCTCTGCCAGCCCGGAACCCACGAATAACAAGATCCTCATCCTGGGTGCCATGGCTGAGCTGGGCGAGGAAAGCCTGGCCGAACACCAGGGTATCGTGGATCTCATCGGACAATATCCCTGGAAAGAGGTGGTGCTGGTGGGTGGTGACTTCCAAAAGCTGCAGCATCCTTTTAAACGTTTCGACAATAGCAAGGAGGCGGGCGCGTGGTTGAAGACCGCCGCGCCCAAGAATGCCTGGTTGCTTGTAAAGGGTTCGAGGAGTTCGAAGATGGAGGAGGTGCTGGCCTAA
PROTEIN sequence
Length: 448
MTIAELYQLFLQYPSVQTDTRKLRQGDIFFALKGPNFNGNGFAPKALEQGAAYAVIDEPVSEVTSSGQTGPNPSDRLILVDDVLTTLQQLALHHRRQFNIPFIAITGSNGKTTTKELIHTVLASTFTTYTTQGNLNNHIGIPLTILSVKKDAQFAVIEMGANHQKEIEGYCKYTLPTHGIITNAGKAHLEGFGGPEGVKKGKGELYDFLRATGGTAFVMWDYDYLRMMSQGIPHVITYGTKDADVMGQAKTSDSNSFLTVDITSGAKTGTIRTQLVGDYNLPNVLVAVTVGHHFGVTDDFIRNAIESYTPSNSRSQLMQKDGNHIILDAYNANPSSMRAAIENFAKMVPAGISASPEPTNNKILILGAMAELGEESLAEHQGIVDLIGQYPWKEVVLVGGDFQKLQHPFKRFDNSKEAGAWLKTAAPKNAWLLVKGSRSSKMEEVLA*