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berkeley_reactor_200306_biofilm_scaffold_29726_23

Organism: 2019_SCN_bioreactor_200211_biofilm_Sphingobacteriia_51_13

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(33541..34860)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2J1E5_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 52.2
  • Coverage: 427.0
  • Bit_score: 426
  • Evalue 2.40e-116
Uncharacterized protein {ECO:0000313|EMBL:ERJ58799.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.2
  • Coverage: 427.0
  • Bit_score: 426
  • Evalue 3.40e-116
DNA mismatch repair protein MutS domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 52.2
  • Coverage: 427.0
  • Bit_score: 415
  • Evalue 1.20e-113

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Taxonomy

Sphingobacterium paucimobilis → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1320
ATGGATGAGCTGAACCTGCTGGGCAAATTCAGGCAGGGATCCGTCTATCACCTGTTCAATAAGGTAAAGACCCGGGGCGGGGAACAGTTGCTGGACAATATGTTCCGTCATCCCCTGACAGACGCCGCCGCCATCAATGAGCGAAGCGCCATCTTTCATTTCTTCCAGGAGACGAAGCTGGACTTTGCTTTCGATGTGCAGGAGATCAGTGTCATGCGGGAATACCTGGATGATAACGCGGGCAACAGTGCCCTGGTGGTGCTGGTAAGGACGCTGATCAAAAGAGCGCTTTCCGGCCTGGCCCGCGACGGGCGGTATAAGAAAAGCGTCCAGGGCCTTCAGGCCACCATCGGGACGCTTAACCGTTGTTATGCCTTCCTGGAAATGGCAGGAGATATGAAGGGGCCCTTTGCTCACAGGGTCAGGGCTATGAAGCATCTGCTGTCGGATAAGCGCCTGGAAAAGGTGCGCAGCATCGATATCTATAGCTCCCTGCGCATAAATACCCTGGCCTGGTTCGATCATCTTCTAAAGAGCGTATTGCATAAAGAGATGGAAGATGTCCTGTCCTTCATCTACGAGCTGGATGTGAATATCGCGGTGGCGGGGGTGGCCCGCGCCAGATCTTTTGTCTATGCGAAGGCCTGGGCGCCGGAGAAAAATATCCTTAGGGCCCACGCACTCTGCCATCCCTGTATCAAAGGCGCGGTGGGTAATGCCATTTCCATGCATACGGAGAAGAATGTGCTGTTCCTGACGGGAGCGAATATGGCGGGCAAATCGACCTGGATGAAATCCGTGGGCATAGCCATGTACCTGGCCCATATGGGTTTCCCGGTGGCTGCCGGGGGCATGGAATTCTCTGTCCGGGAGGGCCTTTACTCATCCATCAACGTAGCGGATAATATAAGTCTCGGATATAGTCATTTTTATGCGGAAGTAGTAAGAGTAAAGCAGGCTGCTGAGGCCACCGCCTCGGGGAAAAGGCTGTTATTGATGTTCGACGAGCTGTTCAAAGGCACCAATGTAAAGGACGCCTATGACGGAACGCTGGCAGTAACAGAGGCCTTTGCCGCCTACAAAGGTTGCCTGTTCATCGTCTCCACCCATATCATCGAGGTAGGGGAAGCCTTGAAAGACCGCAGCAATATTCATTTTGTCTACATGCCTACGGTGATGGAGGGGGCCTACCCCCGGTATACCTACCGGCTGGAGGAAGGTATTACGGCAGACCGCCAGGGAATGATGATCATAAAGAATGAAGGGATTTTAGATTTGATTGGGCATGAGGAGGCTCCGGGAGGTTGTAAGATAGGTTAG
PROTEIN sequence
Length: 440
MDELNLLGKFRQGSVYHLFNKVKTRGGEQLLDNMFRHPLTDAAAINERSAIFHFFQETKLDFAFDVQEISVMREYLDDNAGNSALVVLVRTLIKRALSGLARDGRYKKSVQGLQATIGTLNRCYAFLEMAGDMKGPFAHRVRAMKHLLSDKRLEKVRSIDIYSSLRINTLAWFDHLLKSVLHKEMEDVLSFIYELDVNIAVAGVARARSFVYAKAWAPEKNILRAHALCHPCIKGAVGNAISMHTEKNVLFLTGANMAGKSTWMKSVGIAMYLAHMGFPVAAGGMEFSVREGLYSSINVADNISLGYSHFYAEVVRVKQAAEATASGKRLLLMFDELFKGTNVKDAYDGTLAVTEAFAAYKGCLFIVSTHIIEVGEALKDRSNIHFVYMPTVMEGAYPRYTYRLEEGITADRQGMMIIKNEGILDLIGHEEAPGGCKIG*