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berkeley_reactor_200306_biofilm_scaffold_29726_25

Organism: 2019_SCN_bioreactor_200211_biofilm_Sphingobacteriia_51_13

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(36177..38492)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, permease protein, putative n=1 Tax=Pedobacter sp. BAL39 RepID=A6EG97_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 52.1
  • Coverage: 779.0
  • Bit_score: 797
  • Evalue 7.00e-228
ABC transporter, permease protein, putative {ECO:0000313|EMBL:EDM35531.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.1
  • Coverage: 779.0
  • Bit_score: 797
  • Evalue 9.80e-228
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 49.1
  • Coverage: 778.0
  • Bit_score: 733
  • Evalue 4.60e-209

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Taxonomy

Pedobacter sp. BAL39 → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2316
ATGATATTCAAAATTGCGAAAACAGAGCTTCGCAACCTCTTCTATTCCCCTGTAGCCTGGTTCCTGGCCATCGTATTCATGATCGAGTGCGCTATATTCTATACCACGCCGCTGACGCTGGGCGCGACCTGGCAGGAGCTCCTGCAGAAAAATAATCCCCATTGGAAGGACTGGGCAGAACAGTCGATGACCCTGAGCATGTACCTGGGGCAGGACGGCATCTTTTTAAATGTAATGCAAAACTTGTATCTGTTCGTTCCGCTGCTGACCATGGGCCTGATCAGCCGCGAGATCAATAACGGCACGATCAAGCTGCTGTATTCTTCACCGGTGAAGGTCCGCGAGATCGTCGGGGGGAAATTTCTGGCCCTCATGACCTATAATGCCGTCCTGCTGTCGATCGTAGGGTTCTTCATGGTTTCAGGCGCCTTTACTATACGCGCGGTGGATTATGGCATGCTCCTGTCCGCCGCGCTTGGATTTTACCTCATGCTGTGCGCTTACACGGCCATCGGTATGTTTATGTCCAGCCTTTCTACCTACCAGATCGTATCCGCCATCGCTACTTTCATCACGATTTTTATCCTGAGCCGTATTGGCGGCTTATGGCAGAAATATGATTTCGTCCGGGACCTGACCTATTTTCTTTCCCTGAATGGACGGACGGGTAAAATGCTGCAGGGATTGATCACGACCAGGGACCTGGTGTATTTCATAGCCGTCATCTATATGTTCCTCGGTTTCACCTACCTCAAGCTGGCAGGAGCGCGCGAATCCTCCCCCTGGTACCGGAAAGCGCTCCGCTTTACCGTGGTGATCGTCTCGACCCTGGCAGCAGGCTATATCACCTCAAGACCGGCACTGGTGGGCTATTGGGATACCACCGCCGCCCAGATCAATACGGTGCATCCCAAAACACAGAAGATCATTAAACAGCTGGGCAAAGACCCTTTGGAGGTGACGCTCTATACCAATATCCTGGGAGGCGGCGTCTCACAGGGACTGCCGGAAGCACGCAACAATTATTTAGCCGCACTTTGGGAACCCTATATCCGGTTCAAACCCGACATTGATTTCAAATATGTCAACTATTATGATTACGACACCCGGAAGGACAGCCTGATCTACAAGACCTTTCCCAATAAGACCCTGAAAGAGATTGCGGGCATCTTCGCGGAGGGTATGGGCGCCGACCTCTCCAAATTCAAATCCGGTGAAGAGGTGCATAAGACCGTCGACCTGCGGCCGGAGAACTACAGGCTGGTGATGCAGGTGAAATATAAAGGACAAAGCGCCTTTCTCCGGACCTTCGACGACAATAAGTTCTGGCCCGATGAACAGCAGGTGAATGCGGTCTTCCGGAAATTGATCGATGGCAGGCTGCCAAAGGTACGCTACCTCACAGGCGACCTGGAGCGGGATATCAACAAGACAGGCGAGCGGGAATTCCAATATCACAGCGCTAATAAGAACAGCCGTTATTCCCTCATCAATAATGGATTCGATATCGATACCCTCTCATTGGATTACCAGGATATTCCTGCAGACGTCAAGGTCCTGGTGCTGGCTGATCCCAAGCGCGCGCTGAGCGCCGCTTCGATGGATAAGCTTCACCAATACATCGATAAAGGCGGCAATCTGCTGATCCTGGGCGAGCCGGGGAAGCAGCAGATGCTTAATCCCATGCTGCAGCAGCTGGGTATACGGCTGACGGAAGGCACCCTGGTGGAAGTGACGAAGAACGAGATGCCGCACATGCTGAGGCCTTCTGTCACCAAGCCGTTCGGCCTCTCCCTGGCAGAGGAAAACGATCTTATAATGTTTAGAGATATCCCTGACTCCCTGAAAATGACGATGCCCGGAGCGGTAGGGGTCGAGCGGACGGGGGACAGCCTTTTCACCGCTAAGCCGGTGATGGTGGCGTCTCAGCAGACCTGGCTGAAAGCCGGCAAGCTGGTAGTAGACTCCACTCCGCCTGTCTTCACGCCGCAGGAAGGGGATCGCAGAGGGACATTTACGACGATGCTGGCGCTGACCAGGAAGCTAGGCGGCCGGGAGCAACGCATCATTGTTTGCGGTGATGCGGATATGATGAGCAATGTAAGATCGGGTGGCGCCGGTCTGGGCAGGTCTTTATACAGCTGGCTGGATGACAACGATTTTCTTGTCTATACACCACGGCCTAACCCGGCGGATAACCTGTTGTCCATCTCGTCCAAAGGAGCGAAGACACTGGCGACCGTCGATATATGGGTACTTCCTGCGCTGGTCCTGATACTGGCAATCCTTCTATTGATCAGACGAAAAAGAAAATAA
PROTEIN sequence
Length: 772
MIFKIAKTELRNLFYSPVAWFLAIVFMIECAIFYTTPLTLGATWQELLQKNNPHWKDWAEQSMTLSMYLGQDGIFLNVMQNLYLFVPLLTMGLISREINNGTIKLLYSSPVKVREIVGGKFLALMTYNAVLLSIVGFFMVSGAFTIRAVDYGMLLSAALGFYLMLCAYTAIGMFMSSLSTYQIVSAIATFITIFILSRIGGLWQKYDFVRDLTYFLSLNGRTGKMLQGLITTRDLVYFIAVIYMFLGFTYLKLAGARESSPWYRKALRFTVVIVSTLAAGYITSRPALVGYWDTTAAQINTVHPKTQKIIKQLGKDPLEVTLYTNILGGGVSQGLPEARNNYLAALWEPYIRFKPDIDFKYVNYYDYDTRKDSLIYKTFPNKTLKEIAGIFAEGMGADLSKFKSGEEVHKTVDLRPENYRLVMQVKYKGQSAFLRTFDDNKFWPDEQQVNAVFRKLIDGRLPKVRYLTGDLERDINKTGEREFQYHSANKNSRYSLINNGFDIDTLSLDYQDIPADVKVLVLADPKRALSAASMDKLHQYIDKGGNLLILGEPGKQQMLNPMLQQLGIRLTEGTLVEVTKNEMPHMLRPSVTKPFGLSLAEENDLIMFRDIPDSLKMTMPGAVGVERTGDSLFTAKPVMVASQQTWLKAGKLVVDSTPPVFTPQEGDRRGTFTTMLALTRKLGGREQRIIVCGDADMMSNVRSGGAGLGRSLYSWLDDNDFLVYTPRPNPADNLLSISSKGAKTLATVDIWVLPALVLILAILLLIRRKRK*