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berkeley_reactor_200306_biofilm_scaffold_29726_30

Organism: 2019_SCN_bioreactor_200211_biofilm_Sphingobacteriia_51_13

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(45298..46464)

Top 3 Functional Annotations

Value Algorithm Source
Anti-FecI sigma factor, FecR n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YA56_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 40.8
  • Coverage: 390.0
  • Bit_score: 290
  • Evalue 1.80e-75
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:EHQ25937.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.8
  • Coverage: 390.0
  • Bit_score: 290
  • Evalue 2.60e-75
anti-FecI sigma factor FecR similarity KEGG
DB: KEGG
  • Identity: 42.2
  • Coverage: 398.0
  • Bit_score: 280
  • Evalue 4.10e-73

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Taxonomy

Mucilaginibacter paludis → Mucilaginibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1167
ATGGAAGATAAAAAGATCATAGCATTGCTGGAAGGATATGCGGCGGGCACGCTTACCAACGAGGAAGAGATCGCATTCCTGAGATGGTACAGCGAAGCCAGCCTGGAAGAGTTTCACCGTTGCCTCGGCCAATGCCAGCATTTGCCCCAGCAGCTGTCTATGTATCCATCGATACCGGAAGCATTCAGACAGCGGCTGCAAAAAGACATCGCCCCACCATCGATCCCTTTATACCGTCGCATGTGGCCGGCATGGGCCGCGGCCATCCTTTTAACGATAGGTGTGGGAACGTATTATTTTATCCATAGCGGGTCCGCTCCGTCAGTGGCCGCCGATACTGGTCATCCTTCGTCCAATGATATAGCGCCGGGTACAACAAAAGCTGTGCTGACGCTGGCAGACGGCAGCCGGATCACTTTGGACAGCGCCCGGTTCGGGGAGCTGGCCATTCAGGGAAAGACCGCTGTGATGCATAATAACGGCAGCATCAAATACGTGGGCAGCCAGGACCCGATGGAGAAGATGTTGACAAAAAATATACTTTACAATACGATGACCACAGGCCGCGGCGAACAATCCCCGCCGCTTACCTTATCCGATGGTACGAAGGTCTGGCTCAATGCCCTTTCCTCCATCCGGTTCCCCGTTGCGTTTACAACCAATACCAGGGAGGTGGAGATCACAGGTGAAGCTTTCTTTGATATAGCGAAAGATCAGTCGAAGCCCTTCCATGTAAAGAGCAAAGGCCAGGACATAGAGGTGCTGGGCACTCAATTCAATATCAATTCATATCCCGATGAGCCGGATAGCCGCACGACGCTGGTGCAGGGCAAAATAAAGGTCATCGCAGGGCAGGAGCTGGTTCTGGAGCCGGGCCAGCAGGCAAGCGTGCATGAGGGCATCCGCCTCGTGAAAGACGCAGACATCGATCAGGTAATAGCCTGGAAGACCGGCTTATTCAATTTCAACCATGCCGATCTGCAGACTGTCCTACGGCAATTGTCCCGGTGGTATGACATCGATGTGAAGTTCGAAGGACAGATACCGGTGCGGTCATTCCATGGCAAGATCACGCGGGACCTGAACCTTTCCCAGGTCATCCAGCTGTTGCAGGACGTGAAAGTGAAATTTCGCATAGAAGGCAGGACCCTTATCATTACACCATAG
PROTEIN sequence
Length: 389
MEDKKIIALLEGYAAGTLTNEEEIAFLRWYSEASLEEFHRCLGQCQHLPQQLSMYPSIPEAFRQRLQKDIAPPSIPLYRRMWPAWAAAILLTIGVGTYYFIHSGSAPSVAADTGHPSSNDIAPGTTKAVLTLADGSRITLDSARFGELAIQGKTAVMHNNGSIKYVGSQDPMEKMLTKNILYNTMTTGRGEQSPPLTLSDGTKVWLNALSSIRFPVAFTTNTREVEITGEAFFDIAKDQSKPFHVKSKGQDIEVLGTQFNINSYPDEPDSRTTLVQGKIKVIAGQELVLEPGQQASVHEGIRLVKDADIDQVIAWKTGLFNFNHADLQTVLRQLSRWYDIDVKFEGQIPVRSFHGKITRDLNLSQVIQLLQDVKVKFRIEGRTLIITP*