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berkeley_reactor_200306_biofilm_scaffold_64586_28

Organism: 2019_SCN_bioreactor_200211_biofilm_Sphingobacteriia_51_13

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 50349..51380

Top 3 Functional Annotations

Value Algorithm Source
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.6
  • Coverage: 343.0
  • Bit_score: 584
  • Evalue 5.80e-164
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP50_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 86.6
  • Coverage: 343.0
  • Bit_score: 584
  • Evalue 4.10e-164
Holliday junction DNA helicase subunit RuvB similarity KEGG
DB: KEGG
  • Identity: 86.6
  • Coverage: 343.0
  • Bit_score: 584
  • Evalue 1.20e-164

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1032
ATGTCCAATCTCAATCTCAACAATGACAAACAGGCTTTGAGCGCTTCTGACAAGGAGTTTGAGAATAATATACGGCCTGCTGCCATTGAAGATTTTTCCGGTCAGCCACAGCTGATCGAAAACCTTCGCGTCTTCATCAAGGCGGCAAAGATGCGCGGGGAGGCCCTGGACCATATCCTCTTCCATGGTCCTCCGGGACTGGGCAAGACCACGTTGTCAAGGATCGTCGCCAATGAGCTGGGCGTGCATATCAAAGAGACATCCGGTCCCGTTATCGAGAAGCCGGGCGATCTGGCCGGGCTGCTGACAAACCTGGAACCAAACGATGTACTTTTTATCGATGAGATCCACCGGCTCAGCACGGTGGTAGAAGAATACCTGTACGCTGCAATGGAGGATTTCCGCATCGATATCATGATCGACTCCGGTCCCAATGCACGCAGCATCCAGCTGACCATTCATCCTTTTACGCTGGTAGGCGCCACTACCCGTAGCGGTCTGCTGACAGCACCCTTGCTTTCCAGGTTTGGTATCAAATCCAGGTTGGAGTATTATCCCGCAGACACATTACAGCACATAGTCCTTCGCTCATCAGGCATACTGGGCACGAAGATCACGTCTGATGCCGCAGGGGAGATCTCCCGCCGCAGCCGTGGTACGCCCCGCATCGCCAACGGGCTGTTGCGAAGGGTCCGTGATTTTGCCATGGTGCTGGGCAATGGTATCATCGACCTGGCGATCACCCAGCATGCGCTGAGAGCGCTCAATGTGGATGAACATGGCCTGGATGAGATGGATAACCGCATTCTTTCCACCATTATAGAAAAGTTCAAAGGGGGCCCTGTAGGCATTACTACCATCGCCACCGCAGTCGGCGAGGAAACGGGCACGCTGGAAGAGGTATACGAACCATTCCTGATACAGGAAGGTTTCCTCATGCGGACACCCCGCGGCAGAGAGGTCACCGCTAAAGCCTATGAACATTTGGGAAAAAACCGGCCCGGCCGGCCGGGAGAGCTGAATTTATTTTAG
PROTEIN sequence
Length: 344
MSNLNLNNDKQALSASDKEFENNIRPAAIEDFSGQPQLIENLRVFIKAAKMRGEALDHILFHGPPGLGKTTLSRIVANELGVHIKETSGPVIEKPGDLAGLLTNLEPNDVLFIDEIHRLSTVVEEYLYAAMEDFRIDIMIDSGPNARSIQLTIHPFTLVGATTRSGLLTAPLLSRFGIKSRLEYYPADTLQHIVLRSSGILGTKITSDAAGEISRRSRGTPRIANGLLRRVRDFAMVLGNGIIDLAITQHALRALNVDEHGLDEMDNRILSTIIEKFKGGPVGITTIATAVGEETGTLEEVYEPFLIQEGFLMRTPRGREVTAKAYEHLGKNRPGRPGELNLF*