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berkeley_reactor_200306_biofilm_scaffold_88941_26

Organism: 2019_SCN_bioreactor_200211_biofilm_Sphingobacteriia_51_13

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(50911..55680)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.0
  • Coverage: 1592.0
  • Bit_score: 2696
  • Evalue 0.0
GAF sensor hybrid histidine kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9Q4_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 88.0
  • Coverage: 1592.0
  • Bit_score: 2696
  • Evalue 0.0
GAF sensor hybrid histidine kinase similarity KEGG
DB: KEGG
  • Identity: 88.0
  • Coverage: 1592.0
  • Bit_score: 2696
  • Evalue 0.0

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 4770
ATGGTGGACCAGCTGAACTCTTTCTCATCGGAGGTGACGCGTGTGGCCCGTGAGGTGGGTTCTGAAGGAAAGCTGGGTGGACAGGCGGACGTACCGGGTGTGGGGGGTACCTGGAAGGACCTTACCGATTCGGTAAACAAGATGGCGTCGAACCTCACTTCGCAGGTGCGTAATATCGCCGAGGTGACGACTGCGGTGGCGACGGGCGACCTTTCCCGTAAGATCGATGTGGATGTAAAGGGAGAGATCCTGGAATTGAAGAATACGATCAACACGATGGTGGACCAGCTGAACTCCTTCTCCTCGGAAGTGACGCGTGTGGCCCGTGAGGTGGGTTCTGAAGGAAAGCTGGGCGGACAGGCCGCTGTGGAGGGGGTTGGCGGCGTATGGAAGGACCTTACCGACTCGGTGAATGGTATGGCGTCGAACCTCACCGGCCAGGTGCGTAATATTGCCGAAGTAACGACGGCGGTGGCGAAGGGCGACCTATCCCGTAAGATCACGGTGGACGTGAAGGGGGAGATCCTGGAGCTGAAGAATACGATCAATACGATGGTGGACCAGCTGAACTCATTTGGATCGGAAGTGACGCGTGTGGCCCGTGAGGTGGGTTCTGAAGGAAAGCTGGGCGGACAGGCGGACGTACCGGGTGTGGGAGGTACCTGGAAGGACCTTACCGATTCGGTAAACAAGATGGCGTCGAACCTTACCTCGCAGGTGCGTAATATCGCGGAGGTGACGACGGCGGTGGCCAATGGAGACCTTTCCCGTAAGATCACGGTGGACGTGCAGGGAGAGATCCTGGAGCTGAAGAATACGATCAACACGATGGTGGACCAGCTGCGTGGTTTTGCGTCAGAAGTAACGCGTGTTGCCCGTGAGGTGGGTACGGAGGGTAAACTGGGCGGGCAGGCTTTTGTACCTGGCGTGGCCGGCACCTGGAAGGACCTTACGGACTCGGTGAATGGTATGGCCTCGAATCTCACCGGCCAGGTGCGTAATATCGCGGAGGTGGCGATTGCCGTGGCCAACGGCGACATGTCCAAGAAGATCACGGTGGACGTCCGTGGTGAGATCCTGCAGCTGAAGGAGACGCTGAACACGATGGTTGACCAGCTGCGTGCATTTGCATCGGAAGTGACGCGTGTGGCCCGCGAAGTGGGCACGGACGGTAAGCTGGGAGGACAGGCGTTCGTACCTGGCGTGGCCGGTACCTGGAAAGACCTTACGGACTCGGTAAACCAGATGACGGGGAACCTGACAGCGCAGGTGCGAAATATTGCCGAAGTGACGAAGGCGGTGGCATCGGGAGATTTGTCCAAGACGGTGGCCATCGACGTTAAAGGAGAGATCCTGGATCTTAAGAATACGATCAATACGATGGTGGAACAGCTGAACTCGTTTGCATTCGAGGTGACGCGTGTGGCCCGTGAAGTGGGTACGGAAGGTAAGCTGGGTGGACAGGCCGAGGTACGTGGTGTGGCCGGAACCTGGAAGGACCTTACCGATTCGGTGAATATGATGGCCTCTAACCTTACCAACCAGGTGCGCGGTATCGCGAAGGTGGTGACGGCGGTGGCGACGGGTAATCTTAAGCAGAAGCTGTCCATTGTATCCCGTGGCGAGGTGGCACAGCTAACGGATACCATCAATGAGATGATCGATACCCTGGCATTGTTTGCCGACCAGGTGACTACGGTGGCCCGTGAGGTGGGTGTCGAAGGCCGGCTTGGCGGTCAGGCCAGCGTACCGGGTGCTTCCGGTATCTGGAAGAACCTGACGGAGAATGTGAACCAGCTTGCGCAGAACCTGACCACACAGGTGCGTTCCATTTCGGAAGTAGCCTCCGCGGTGACGAAGGGTGACCTTACCCGTACCATCCGCGTGGAAGCGAAAGGTGAAGTGGAAGCATTGAAAGATACTATCAACCAGATGATCGCCAACCTGAAGGAAACGACCTTGCGGAACCAGGAGCAGGACTGGCTGAAATCCAACCTGGCCAAGTTTACACAGATGCTGCAGGGACAGAAGGACCTCAACACGGTGACGCAACGGATACTGTCGGAGCTGGCGCAGGTGGTTATCGCCCACTACGGCGCCTTCTATATCCTTAAACAGGATGAAGATACCCGGGTGGACAAGCTACGATTATTTGCCGCCTATGGTTATAAATCGGACAGGAACATACCAACGGAATTTTCTATCGGGGAGGGACTCGTTGGGCAGGTGGCCTTCGAAAAGGAAAGGATCATTCTCTCGAACGTACCTTCCAATTATATAAAGATCAGCTCGGGACTTGGCAGGGCCAAGCCGGCGAACCTCATCATCCTGCCTGTGTTGTTCGAGAACAAGGTAAAGGCAGTTATCGAGCTGGCATCACTGGATGTGTTCAGCGAGACGCACCTTGACTTCTTAAGCCAGCTGACGGAAAGTATCGGTATCGTGTTGAACACCATTGAAGCCAACAGCCGTACGGAAGAGCTGCTGACCCAGTCGCAGTCGCTGGCGGGTGAGCTGAAGATCCAGCAGGAGGAGCTGAGAAGGACCAATGACGAGCTGCAGGATAAGGCGTTGCTGCTGGTAAAACAAAAGAACGAAGTGGAGGCAAAGAACAAGGAGGTGGAAGAAGCCCGGCGTTCGCTGGAAGAAAAGGCCGAGCAGCTGACCCTGACCTCCAAGTACAAATCAGAGTTCCTGGCCAATATGTCACATGAGCTCCGGACGCCGCTGAACAGCCTGCTGATCCTTGCGCAGCAGCTGTATGAGAATGCGGAGGGCAACCTTACGGACAAGCAGATACGCTACGCCAAGACGATCCACAGCTGTGGTGATGACCTTATCCAGCTGATCAATGATATTCTCGATCTTTCCAAGATCGAATCCGGCTTTATCTCGGCGAATATCTCCCCGGTCAGGTTTGGAGAGATCGCTTCCTTTGTGGAGACCACGTTCAAGCCTATTTCCGAGGCGCGGCACCTTCGGTTCACCATCGAGACGGATGCACGGCTGCCGCAGTCCATGGAGACGGACCTGCAGCGGTTGAACCAGATCCTGAAGAACCTGCTGTCCAACTCATTCAAGTTTACAGAAAAAGGTGAGGTGAAGCTGAAGATCTACCAGGCTGAGAACAACTGGAAGGCCGGCAACCCTAACCTGGACAATGCGGAAAAGGTAGTGGCGTTTGCCATCAGTGACACGGGTATCGGCATCCCACAGGAAAAGCAAAATATCATTTTCGAAGCGTTCCAGCAGGCGGAAGGTTCCACCAGCCGTAAGTATGGCGGCACGGGGCTGGGCCTTTCCATCAGCCGTGGACTGGCCGAGCTGCTGGGAGGCACCATCGAGCTGGAGAGCCATGTTGGAAGGGGTAGCACCTTCACCCTGTTCGTACCTATCGAAAATACGGCTACAGTGATCTCGAAGGAAACATCCGATAACCTGAACGCCTATCACCAGCTGCAGCTGGGCGGGGACAGCGGCGAGATAGATACCCTGCTGAATTCGTTGCGAGTGACGAATGAGGATGCCGGCAAGATGACCGTAGTGAACGAGATGATCAACGATACAGGAGATGACAGACATTCTATCCAGGCAGGTGATAAGATCGTGCTGATAGTGGAAGATGACCTGCGTTTTGGCAAGATCATCATCGAAAAGGCCCATGCTTATGGACTGAAAGCTGTCGTAGCGACCAATTATATCGAGGTATTCGACTTTATCAACCGGTTCACCCCCATCGCGATCACGCTCGACGTGAAGCTGCCGGATACCAGTGGCTGGAAGGTGCTGGACCTTTTGCGGAATGACCTCAACTACCGGCATATACCGATCCATCTCATATCGGGAGAGGAGAATAATTCGCTGGCCCTGAAACGGGGCGCCAGAAGCTTCCTGCTGAAGCCGCTGGAAAATGACGCCCTGAATGAGCTCTTTGATGACATCGTCAGCTTTGACAATAAGCAGACCAAGAAGATCCTGGTGGTAGAGGACAATGAAGTGGACTATTCCCAGATCACAAAGCTGCTGGCTGGTGAGCATATCGACGTGACGCTGGCGACAACGGGCAAGAAAGCGTTACAGGAGACGAATATCAAGGACTATGACTGTATCATCCTGGACTATACGCTGCCGGACATATCCGGTCTGGACCTGGTCAACCAGGTCAGCGAGATCAAGAAGAAGCTTACGCCTGTCATTGTATACAGCGCAAAGGATTTCGATAAGAAGGAGCTGTATCATTTGAACCGTACTTCCAATACTATTTTGCTGAAGGGGGTTAATTCCCTGGAGCATCTGCTCGAGGAGACGGTCCTGCAACTGCATATCAACCACAAGGACCTGCCTGTCGAAAAGAGGAAGGTGATCGAGCACATCCGCATGAAGGATGATATCCTGACAGCCAAGAATGTGCTGGTGGTGGATGACGACGTCCGTAACCTCTTTGCGCTGACGACGGTGTTCGAGCGGTACAATATGAACGTGATCACGGCGGAGAGCGGTAAGGAGGCTATCAATATCATCAACGACGACAAGCAGAAGATAGACATGGTGCTGATGGATATCATGATGCCGGAAATGGACGGATACGAGACGACCCAGAAGATACGGCGTGAGCACAAGAATTCTACTCTCCCTATCATTGCGGTGACAGCCAAGGCCATGAAGGGCGACCGGCAGAAATGTATCGAGGCCGGTGCGTCGGACTATATCACCAAGCCATTGAAGATAGATCAGCTGTTGTCGCTGATGCGGGTTTGGTTCTATAAATAA
PROTEIN sequence
Length: 1590
MVDQLNSFSSEVTRVAREVGSEGKLGGQADVPGVGGTWKDLTDSVNKMASNLTSQVRNIAEVTTAVATGDLSRKIDVDVKGEILELKNTINTMVDQLNSFSSEVTRVAREVGSEGKLGGQAAVEGVGGVWKDLTDSVNGMASNLTGQVRNIAEVTTAVAKGDLSRKITVDVKGEILELKNTINTMVDQLNSFGSEVTRVAREVGSEGKLGGQADVPGVGGTWKDLTDSVNKMASNLTSQVRNIAEVTTAVANGDLSRKITVDVQGEILELKNTINTMVDQLRGFASEVTRVAREVGTEGKLGGQAFVPGVAGTWKDLTDSVNGMASNLTGQVRNIAEVAIAVANGDMSKKITVDVRGEILQLKETLNTMVDQLRAFASEVTRVAREVGTDGKLGGQAFVPGVAGTWKDLTDSVNQMTGNLTAQVRNIAEVTKAVASGDLSKTVAIDVKGEILDLKNTINTMVEQLNSFAFEVTRVAREVGTEGKLGGQAEVRGVAGTWKDLTDSVNMMASNLTNQVRGIAKVVTAVATGNLKQKLSIVSRGEVAQLTDTINEMIDTLALFADQVTTVAREVGVEGRLGGQASVPGASGIWKNLTENVNQLAQNLTTQVRSISEVASAVTKGDLTRTIRVEAKGEVEALKDTINQMIANLKETTLRNQEQDWLKSNLAKFTQMLQGQKDLNTVTQRILSELAQVVIAHYGAFYILKQDEDTRVDKLRLFAAYGYKSDRNIPTEFSIGEGLVGQVAFEKERIILSNVPSNYIKISSGLGRAKPANLIILPVLFENKVKAVIELASLDVFSETHLDFLSQLTESIGIVLNTIEANSRTEELLTQSQSLAGELKIQQEELRRTNDELQDKALLLVKQKNEVEAKNKEVEEARRSLEEKAEQLTLTSKYKSEFLANMSHELRTPLNSLLILAQQLYENAEGNLTDKQIRYAKTIHSCGDDLIQLINDILDLSKIESGFISANISPVRFGEIASFVETTFKPISEARHLRFTIETDARLPQSMETDLQRLNQILKNLLSNSFKFTEKGEVKLKIYQAENNWKAGNPNLDNAEKVVAFAISDTGIGIPQEKQNIIFEAFQQAEGSTSRKYGGTGLGLSISRGLAELLGGTIELESHVGRGSTFTLFVPIENTATVISKETSDNLNAYHQLQLGGDSGEIDTLLNSLRVTNEDAGKMTVVNEMINDTGDDRHSIQAGDKIVLIVEDDLRFGKIIIEKAHAYGLKAVVATNYIEVFDFINRFTPIAITLDVKLPDTSGWKVLDLLRNDLNYRHIPIHLISGEENNSLALKRGARSFLLKPLENDALNELFDDIVSFDNKQTKKILVVEDNEVDYSQITKLLAGEHIDVTLATTGKKALQETNIKDYDCIILDYTLPDISGLDLVNQVSEIKKKLTPVIVYSAKDFDKKELYHLNRTSNTILLKGVNSLEHLLEETVLQLHINHKDLPVEKRKVIEHIRMKDDILTAKNVLVVDDDVRNLFALTTVFERYNMNVITAESGKEAINIINDDKQKIDMVLMDIMMPEMDGYETTQKIRREHKNSTLPIIAVTAKAMKGDRQKCIEAGASDYITKPLKIDQLLSLMRVWFYK*