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berkeley_reactor_200306_biofilm_scaffold_94705_3

Organism: 2019_SCN_bioreactor_200211_biofilm_Sphingobacteriia_51_13

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 3869..4183

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein MerR n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THM1_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 50.5
  • Coverage: 101.0
  • Bit_score: 117
  • Evalue 7.40e-24
regulatory protein MerR similarity KEGG
DB: KEGG
  • Identity: 50.5
  • Coverage: 101.0
  • Bit_score: 117
  • Evalue 2.10e-24
MerR family transcriptional regulator {ECO:0000313|EMBL:KHD90121.1}; TaxID=1511133 species="Bacteria; candidate division TM6.;" source="candidate division TM6 bacterium Zodletone_IIa.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.1
  • Coverage: 94.0
  • Bit_score: 117
  • Evalue 6.10e-24

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Taxonomy

candidate division TM6 bacterium Zodletone_IIa → Bacteria

Sequences

DNA sequence
Length: 315
ATGCTGAACAATGCACTTCCGATTCTTATTCCTTATGAACCTGATGCATTTTGGGAGGAAATCAGGAAAATAGTTCGGGATGAGCTTTCAGGATTAGATTTATCCAGACCATTAACCTCTTCGAAATCGGAAGTTCCTGGGCTTACTTATAAACCGATTTACAAAACGGACGAGATATGTAAACTCTTTAACATTTCTAAACCTACAGTTTATGACTGGATAAAGAATGGAATCCTCAAACCAGTGAAAATTCAAACCAGGGTATATTTTCTATATCAAGATGTTCAACTGTTGCTTAAGTCAGGCGCGAAATAG
PROTEIN sequence
Length: 105
MLNNALPILIPYEPDAFWEEIRKIVRDELSGLDLSRPLTSSKSEVPGLTYKPIYKTDEICKLFNISKPTVYDWIKNGILKPVKIQTRVYFLYQDVQLLLKSGAK*