ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_94705_19

Organism: 2019_SCN_bioreactor_200211_biofilm_Sphingobacteriia_51_13

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 24321..26144

Top 3 Functional Annotations

Value Algorithm Source
Membrane protein insertase YidC n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNN7_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 57.2
  • Coverage: 622.0
  • Bit_score: 685
  • Evalue 3.00e-194
membrane protein OxaA similarity KEGG
DB: KEGG
  • Identity: 57.2
  • Coverage: 622.0
  • Bit_score: 685
  • Evalue 8.60e-195
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane protein YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.2
  • Coverage: 622.0
  • Bit_score: 685
  • Evalue 4.30e-194

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1824
ATGGGAATGGATCGTAATACGGTGATCGGATTTGTGCTACTGGGTCTTTTACTGTTTGCATATTTATTCTTCTCCACGAAGAGCAGCCATGAATTGCAGGCACAGCGCAAGCACGTCGAAGATTCTATTGCCATGGTGAAGGCCCGCCAGGCCCAGGAGGCGAAGGCCCAAGATACTGCCAGCACCGCCGCCACTCCCGACAGCACCGGCGGCGGCAGCGCCTTTGCCGGCTCAGAGCATCTCCTCACGGTAGAAAACGAGCTCCTGAAGATAGTATTCAGCAATAAGGGCGGTCAGCCTGTTTCCGTCGAGCTGAAGCAATTCAAATCTTATGACAGTACGCCGGTGAAGATGGTCGATCCGGCTACGGATAACAGGTGGTCCTATTCCCTGAATACTGGTACCAAGCAAACGGGCCAGATCAGCGATCTCTTTTTCAAGGAAGGACAGCTGGTGAAAAATGCGGACGGCAGCCAGACTGTAAGCTTTACCCTGCCTGATATCAATGGCGCGAATGTCATTCACCAGTATACTATCCGGCCCAATGACTACCGGATCGATCTGAACGTCGTTGCCAATGGGGCCGACAAGCTCTTCACCCAAAGTACTTTTAACCTGAACTGGCGTCCTTATCTCGGGCGTACCCAAAAGCACAATGGCGCACGCGGTATCCTGTACAGTGTCTGCTATATGGAGGACAACAATTTCGACTATATATCCTCTAAGACTGAAGTGGCTTTCGAGAAGCCTGTGCAATGGGTGTCTTTCTCCCAGCAGTTCTTTAATACCACGCTGATCGCGGGTACGGGTAATTCCTTTACTTCCGGCTCCGTGCATGTGACGAAGCCTACCAGTGATACCAGCGATATGCTTGCCCGCGGGGACATAGCGTTGCAGGCTAAATTCCCTGCAGCTGCGTCTGCTACGTTGCCTTTCCAGTTCTACTATGGACCCAACGAGTTCTATGTTCTCGACAAGCAGGCGCCGGGTATGACCAGGATCATCGATCTGGGCAGGGGGATGTACTCCTTTGTGCGTCCTATCAACGTGTATATCATCATGCCGGTGTTCAACTTCTTCAAGGGGCATATCGCCAGCTTTGGTATCGCCATCTTATTATTGACGTTGTTTATCCGTCTGATCACTTCTCCCCTGGTGTACAGCAGCTATCTCAGCGGTGCGAAAATGAAAGCGCTCCGTCCGGAGATCGAAGCGATGAAGAAGCGGGTAGGGAACGATCAGCAGGCGGTGGGTATGGAGCAGATGAAGCTTTTCCGTGAGGCGGGTGTAAACCCTCTTGGCGGCTGTATCCCGGCGTTATTGCAGATCCCCATCTTCTTTGCCTTGTACAGCTTCTTTAATTCCAACATACACCTGCGTGGTGAGAGCTTCTTATGGAGCCATGATCTTTCCACGTATGACAGTATCCTGAACTTTGGGTTTTCCATACCCGGGTATGGGGATCATATCAGTCTGTTTGCTTTGTTGGCCGTGGTCACCAGCTTCCTGATCTCGTTATATGGTATGAGCATGACGCCGGACCAGAGCAATCCTGCCATGAAATATATGCCATATATCATGCCGGTGATGCTGCTGCTGTTCTTCAATAGCCTGGCATCCGCGCTGACCTGGTATTATACAGTCTCCAACGTGATCACGCTTTTACTTCAGTTCGTCATACAGAACTATATCATCGACCATGACAAGATCCTGGCGAAGCTGGATGAGAACAGGCGCAAGCCCAAGACCAAGTCGAAGTGGCAGGAGCGTCTTGAGCAGATGCAGGAACAGCAAAAGCAGGCGCAACAGCGGCCCAGGAAATAG
PROTEIN sequence
Length: 608
MGMDRNTVIGFVLLGLLLFAYLFFSTKSSHELQAQRKHVEDSIAMVKARQAQEAKAQDTASTAATPDSTGGGSAFAGSEHLLTVENELLKIVFSNKGGQPVSVELKQFKSYDSTPVKMVDPATDNRWSYSLNTGTKQTGQISDLFFKEGQLVKNADGSQTVSFTLPDINGANVIHQYTIRPNDYRIDLNVVANGADKLFTQSTFNLNWRPYLGRTQKHNGARGILYSVCYMEDNNFDYISSKTEVAFEKPVQWVSFSQQFFNTTLIAGTGNSFTSGSVHVTKPTSDTSDMLARGDIALQAKFPAAASATLPFQFYYGPNEFYVLDKQAPGMTRIIDLGRGMYSFVRPINVYIIMPVFNFFKGHIASFGIAILLLTLFIRLITSPLVYSSYLSGAKMKALRPEIEAMKKRVGNDQQAVGMEQMKLFREAGVNPLGGCIPALLQIPIFFALYSFFNSNIHLRGESFLWSHDLSTYDSILNFGFSIPGYGDHISLFALLAVVTSFLISLYGMSMTPDQSNPAMKYMPYIMPVMLLLFFNSLASALTWYYTVSNVITLLLQFVIQNYIIDHDKILAKLDENRRKPKTKSKWQERLEQMQEQQKQAQQRPRK*