ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_137586_6

Organism: 2019_SCN_bioreactor_200211_biofilm_Sphingobacteriia_51_13

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 7122..7790

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003781A76 similarity UNIREF
DB: UNIREF100
  • Identity: 67.9
  • Coverage: 221.0
  • Bit_score: 306
  • Evalue 1.40e-80
Transcriptional initiation protein Tat {ECO:0000313|EMBL:KIC92975.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.7
  • Coverage: 222.0
  • Bit_score: 327
  • Evalue 1.10e-86
transcriptional initiation protein Tat similarity KEGG
DB: KEGG
  • Identity: 62.8
  • Coverage: 223.0
  • Bit_score: 291
  • Evalue 1.30e-76

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavihumibacter solisilvae → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 669
ATGGACAGAAGAAAATCCATCAAGGCCCTCATCGTAGGAACCGTGTCGAGCGGGGTGCTGGTAGAAGCCTGTAAGCCCGGCGAAGAGAAAAAAGCGGACGAGCCAAAAGCAGGTGATGCGAAGCCGCCTGCGGAAACCAACCGCATGAAGGAAGAAGAGGAGCATTATAAAGAAGTTGTCGCCAAAACATATTTTACGCCGGATGAAATGGCAACCATCACCATCCTTGGAGACATCATCATCCCGAAGGATGATCACAGCGGCAGCGCTTCCGACGCGAAAGTGCCCGAGTTCATCGAGTTCATCGTAAAGGATATGCCGGCTCACCAGATCCCGATGCGGGGCGGTCTTCGCTGGCTGGACGTACAATGTCTCAACCGTTATGGAAAGGCTTTTAAGGATTGCAGCCAGCAGCAGCAGATCGAAATGGTCGACGAGATAGCCTATCCCAAAAAAGCAAAGCCTGAGATGGCGCAAGGCGTCTCCTTTTTCAACCTGATGCGTAACCTGACTGCAACGGGTTTCTTTACTTCACAGATGGGGGTAAAAGACCTGGGGTATGAAGGTAACAGGCCCAATCAATGGAATGGTGTACCTGCTGATGTCCTGAAACAATATGGACTGGCTTATACGGAGAAGGAATTGAAAGAGTGCAGGAGCTTTTCCTAA
PROTEIN sequence
Length: 223
MDRRKSIKALIVGTVSSGVLVEACKPGEEKKADEPKAGDAKPPAETNRMKEEEEHYKEVVAKTYFTPDEMATITILGDIIIPKDDHSGSASDAKVPEFIEFIVKDMPAHQIPMRGGLRWLDVQCLNRYGKAFKDCSQQQQIEMVDEIAYPKKAKPEMAQGVSFFNLMRNLTATGFFTSQMGVKDLGYEGNRPNQWNGVPADVLKQYGLAYTEKELKECRSFS*