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berkeley_reactor_200306_biofilm_scaffold_137586_8

Organism: 2019_SCN_bioreactor_200211_biofilm_Sphingobacteriia_51_13

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(8613..10679)

Top 3 Functional Annotations

Value Algorithm Source
PKD domain containing protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THR4_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 52.3
  • Coverage: 677.0
  • Bit_score: 745
  • Evalue 4.80e-212
PKD domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 52.3
  • Coverage: 677.0
  • Bit_score: 745
  • Evalue 1.40e-212
PKD domain containing protein {ECO:0000313|EMBL:AEV97492.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.3
  • Coverage: 677.0
  • Bit_score: 745
  • Evalue 6.70e-212

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2067
ATGGAAGTTTCATCCCTGGCCCGATTTAAATCATTTTGGATGCTGTCGAGACAACTGCTTTTTTCTTTACTGTTATTGTCCATCTGCCAGGATTTACGCGCGCAATCAAAATGCACAACGCTCGGCCAGACGCCTGCCACCGCCTTTCCGGTGTGCGGCGCCTCCGTCTTTACACAAACCAAAGTGCCGGAATGCGCCAACGGAGAAGTTCCCGCCCCCTGTCCCAACAATGGCAATGTCTACGAGGACCTCAATCCATATTGGTATAAGTTCACCTGCTTTACAGCGGGAACGCTGGGACTTACCATTACGCCAAAGAATTTGAGCGATGATTACGACTGGCAGATCTTTGATATAACAGGACATGATCCGGCGGATGTATATAGAGATCCTAAGCTGCTGGTAGGAGCAAACTGGTCCGGTCTTCACGGCGTCACCGGTACAAAAAGTAATGCAGTCTCATTGAGCGAATGCGGGTCCTATAACAATTTCAATCCTCCCATCTTCAGTAAGATGCCTACCCTGCAAGAGGGGCACAATTATCTGCTGCTCATTAGCCACTTTACAGGTGATCAGCAGAGCGGTTACGACCTGTCCTTCGCCGGCGGTACGGCTAGTATAACGGACACAGTGCCGCCTTCGCTTAAGGATATCCGTCCTATCTGTGACGGTAGCCGCATCCGGGTGATCCTGAATAAAAAGATGAAGTGCAAAAGCCTGGCGGCCAATGGAAGTGATTTTTCTATCAGCCCTGCCGCGGCGCAGGTCATCAGCGCATCCGGCAATAGCTGCAGCGCGGGGTTTGATATGGATACCGTGACGATAACCCTGAGCAACGGATTGCTTCCCGGCAGCTATTCGGTGGTGATGAAGAGCGGTAATGACCAGAACACCGTCATGGATAATTGTGACAACCAGGTCCCCGTCGGTATGTCCTTGCCTTTTGTCATCGCACCGCCACAGCCGACACCCTTTGATAGTCTGACACCCCCAGGTTGTGCGCCTGAAATACTGGAGCTGGTATTTAAGAATAAAATCAAATGTGCCTCCATTGCCTCCAACGGCAGTGATTTCCAGGTCACGGGCTCGACACCTGTCGCTGTGCTTGCCGCCAACGGGAATTGCGATGCAGATGGCCTGACCAATATCATTAAAGTACATCTGTCCGGTCCGATCCTGAGCGATGGCAATTACCAGGTCAGATTGCTCAATGGAGTCGATGGCAATACGATCATTGATGAATGCGGACTGGTGACGCCGCTCAGCGCACCTTTGCCTTTCACTACACGTGATACGGTGTCAGCAGCTTTTGATTATACTACCCATCTCGGTTGCCTGGAAGACACTGTCGATCTCATATATGCTGATAAGAACGGTGTCGATCGATGGACATGGATCTTTGATGACGGTGATACCAGCCATTTACAATATCCGCAGAAACGTTATCAAGTATTTGGCGATAAACCCATTCAGCTCATCGTCTCCAACGGGACCTGCAGCGACACGACTACAGAGACCGTCCCACTGGACAATGCCATCGATGCGTCTTTTGAAGCGCCCAATATCCTTTGCCCAACCGACGGGGCGACCTTCAAGAATAATACAAAGGGACATGTGGTTTCATGGGACTGGGATTTTGGAGACAACGCAGGCAGCACAGATGAAGTACCCCAGGATCATTTCTATCCGGTCATAGGCATGGAGAGAAAGTATAATATCGCGCTTGTCATCACCAATGAGCTGGGATGTAAGGACACCGCCACCCAATTGATCGACGTGCTCAAATCCTGTTATATTGCCGTGCCTTCCGCCTTCACACCCAATGGCGACGGCATGAACGACTATCTGTATCCATTGAATGCCTATAAAGCGGATAATATGGAATTCAAGGTCTATAACCGCTGGGGGCAGCTGCTGTTTACGTCCAGGGACTGGCTTTCAAAATGGGATGGAAGGGTAGGAGGACAACAGGAACCTTCCGGCACCCTGGTCTGGACCCTCCAATATACAGACAGGGACACAGGTAAAAAATTCTTCCAGAAAGGAACTACCTTACTGATAAGATAG
PROTEIN sequence
Length: 689
MEVSSLARFKSFWMLSRQLLFSLLLLSICQDLRAQSKCTTLGQTPATAFPVCGASVFTQTKVPECANGEVPAPCPNNGNVYEDLNPYWYKFTCFTAGTLGLTITPKNLSDDYDWQIFDITGHDPADVYRDPKLLVGANWSGLHGVTGTKSNAVSLSECGSYNNFNPPIFSKMPTLQEGHNYLLLISHFTGDQQSGYDLSFAGGTASITDTVPPSLKDIRPICDGSRIRVILNKKMKCKSLAANGSDFSISPAAAQVISASGNSCSAGFDMDTVTITLSNGLLPGSYSVVMKSGNDQNTVMDNCDNQVPVGMSLPFVIAPPQPTPFDSLTPPGCAPEILELVFKNKIKCASIASNGSDFQVTGSTPVAVLAANGNCDADGLTNIIKVHLSGPILSDGNYQVRLLNGVDGNTIIDECGLVTPLSAPLPFTTRDTVSAAFDYTTHLGCLEDTVDLIYADKNGVDRWTWIFDDGDTSHLQYPQKRYQVFGDKPIQLIVSNGTCSDTTTETVPLDNAIDASFEAPNILCPTDGATFKNNTKGHVVSWDWDFGDNAGSTDEVPQDHFYPVIGMERKYNIALVITNELGCKDTATQLIDVLKSCYIAVPSAFTPNGDGMNDYLYPLNAYKADNMEFKVYNRWGQLLFTSRDWLSKWDGRVGGQQEPSGTLVWTLQYTDRDTGKKFFQKGTTLLIR*