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berkeley_reactor_200306_biofilm_scaffold_137586_18

Organism: 2019_SCN_bioreactor_200211_biofilm_Sphingobacteriia_51_13

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 24744..25685

Top 3 Functional Annotations

Value Algorithm Source
NAD-dependent epimerase/dehydratase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PDU7_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 53.5
  • Coverage: 301.0
  • Bit_score: 331
  • Evalue 7.50e-88
NAD-dependent epimerase/dehydratase similarity KEGG
DB: KEGG
  • Identity: 53.5
  • Coverage: 301.0
  • Bit_score: 331
  • Evalue 2.10e-88
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ACU61447.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.5
  • Coverage: 301.0
  • Bit_score: 331
  • Evalue 1.10e-87

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 942
ATGTCCATCCATACTATCCTCGGCGCCGGGGGCATTATCGCCGAAAACCTTGCTAAACATCTGATCCAACGGCAGCTACCCGTTCGGCTCGTATCCCGGCATCCGTCCCCGCACCCTGGCGCCACCATCGTGGCTGCCGACATCACCCGGGCTGATGAGACGCTGGAGGCCATCAGGGGCTCCTCTGTCGTATACTGCTGTGTAGGATTAAAATATGATTTCTCCATCTGGCGGCAGGCCTGGCCTCTCATCATGAACAATATCATCGATGCCTGCCGGCAGACAAAGGCCCGGCTGATCTTCTTCGACAATGTCTATATGTACGGCAGGGTCGATGGCGCCATGACCGAGGAAACGCCTTATGATCCTTCCAGCCGCAAGGGAGATCTTCGTGCCCGTATCGCCACGCAGCTGATGAGCGAGGTACGGAAGGGCAATATCACGGCCAGCATTGCCCGGGCAGCCGACTTCTACGGACCTGGAGCCGACAAGACCAGCGTTGCCAACCTGCTGGTGTTCCAGCGGCTGGCAAAGAACCAGAAAGCCCAATGGATGGTCAATCTTCATGCCCGGCATTCTTTTACCTATACGGATGATGCCGCCAGGGCCCTGTACCTGCTTGGCACAGACGAAAACTCCTGGAACCAGGCATGGCATCTTCCCACTGCCTCCAATCCCCTTACGGGCGAGGAATTTATATCGCAGGCCGCCGCTGCGCTGGGGAAAGCGCCCCGCAGCATGGTGCTTCCCAAATGGATGATCCGTATGGGAGGGCTTTTCGACAGGACCACGGCCGAGCTGTACGAGATGCTGTATCAATATGAATATGATTATTTGTTCGACTCTTCGAAATTTGAAAAAGCGTATAACTTTCAACCGACGTCCTACGCGGCAGGCATAAAAGCAACAGCCAATGCGTATATCGACGGCACCGGCTTATGA
PROTEIN sequence
Length: 314
MSIHTILGAGGIIAENLAKHLIQRQLPVRLVSRHPSPHPGATIVAADITRADETLEAIRGSSVVYCCVGLKYDFSIWRQAWPLIMNNIIDACRQTKARLIFFDNVYMYGRVDGAMTEETPYDPSSRKGDLRARIATQLMSEVRKGNITASIARAADFYGPGADKTSVANLLVFQRLAKNQKAQWMVNLHARHSFTYTDDAARALYLLGTDENSWNQAWHLPTASNPLTGEEFISQAAAALGKAPRSMVLPKWMIRMGGLFDRTTAELYEMLYQYEYDYLFDSSKFEKAYNFQPTSYAAGIKATANAYIDGTGL*