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berkeley_reactor_200306_biofilm_scaffold_137586_22

Organism: 2019_SCN_bioreactor_200211_biofilm_Sphingobacteriia_51_13

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(27900..30518)

Top 3 Functional Annotations

Value Algorithm Source
molecular chaperone ClpB n=1 Tax=Segetibacter koreensis RepID=UPI00035EE016 similarity UNIREF
DB: UNIREF100
  • Identity: 81.7
  • Coverage: 873.0
  • Bit_score: 1412
  • Evalue 0.0
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.7
  • Coverage: 866.0
  • Bit_score: 1402
  • Evalue 0.0
molecular chaperone ClpB similarity KEGG
DB: KEGG
  • Identity: 81.4
  • Coverage: 866.0
  • Bit_score: 1388
  • Evalue 0.0

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Taxonomy

Flavihumibacter petaseus → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2619
ATGAACCTGAACAATTTTACCATCAAAGCCCAGGAAGCCATCGCCAAGTCGCAGCAATTAGCCTTCGACAAAGGCAATCCTGTCATCGAAACGGAGCATTTGCTCAAATCGTTGCTAAGCGAAGAAGATTCTTTGGTAGAATTTCTGTTGAAAAAGAACAATGTCAATGTCAATTTCGTCGAGGGAAAGCTCGATGAAAGCATCAATAAACTACCAAAGACCAACGGCGGCGAGCCCGCCCAGACCATCAGCCGCGACATGAATAATGTGATGTTGCGTGCAGGTTCTGATCTGAAACAGTTTGGCGACGAGTTCGTAAGCGTAGAACATATCCTGCTGGCAGTCCTGCAGGGTAATGACAACGCGTCCAAATTATTGAAAGATGCCGGTCTGACGGAAAAAGGCCTGGTCGCAGCCATCCGGGACCTGCGGAAAGGTTCCACCGTCAATTCACAGACACAGGAAACCTCTTTTAACGCCCTGAACAAATATGCCAAGAACCTGAATGAGCTGGCCCGCCAGGGAAAGCTTGACCCTGTCATCGGCAGGGACGAAGAGATCAGGAGAACCCTGCATATCCTTTCCCGCCGGAGCAAGAACAATCCCATCCTGGTAGGTGAGCCAGGTGTAGGTAAGACTGCCATCGCCGAAGGGCTGGCACATCGCATCGTCAACGGGGACGTTCCCGAAAACCTCCGTTCAAAGGTCATCTATGCCCTGGATATGGGACAGCTGATCGCCGGCGCTAAATACAAGGGTGAATTCGAAGAGAGATTGAAAAGCGTCGTAAAGGAGGTCTCCGGCAGCGACGGCGAGATCATCCTCTTCATCGATGAGATCCATACCCTGGTGGGTGCAGGTGGGGGAGAAGGGGCCATGGACGCCGCCAATATCCTCAAGCCGGCGCTTGCCCGTGGCGAGCTCCGGGCCATCGGTGCCACCACATTGAACGAATACCAGAAATTTTTTGAAAAAGATAAAGCGCTGGAACGTCGCTTCCAGAAAGTACTGATCGACGAACCCAACGTGGAAGACGCTATTTCTATCCTTCGTGGATTGAAGGATCGTTATGAGACGCACCACCACGTACGGATCAAGGACGAGGCTATCATCGCCGCAGTTGAGCTTTCCCATCGTTATGTGACGGACAGGTTCCTGCCCGATAAGGCCATCGACCTGGTGGATGAGAGCGCAGCCAAGCTCCGGCTGGAAATGAACTCCATGCCCGAAGAGCTGGACAGGCTGGAACGGCAGATCCGTCAGCTGGAGATCGAAAGAGAAGCCATCAAACGTGAGAACGATAAAGAAAAGCTTAAAGAGCTCAGCGCTGAAATAGGCAATCTGTCCGTCAGCCGCGATACCCTCCGGGCAAAATGGAAACAGGAGAAGGAACTCGTGGAAAAAGTGCAGAACGCAAAGGCAGAGATCGAGAACCTGAAGCTGGCGGCGGAAAAGGCAGAAAGAGAAGGACAGTACGGACTGGTAGCCGAAATTCGATATGGAAAAGTAAAAGAGCAGGAAAAGATCATCGACGAATATTCGCGTGAGCTGGCTACCATCAGTGCCACATCGCGATTGATGAAGGAAGAAGTGGACGCGGAAGATATTGCAGAGGCCGTTGCAAAAGCAACGGGTATCCCGGTGGCTAAAATGCTGCAGAGCGAAAGAGAGAAATTACTGAACCTGGAAGATGAGCTGCACAAGCGCGTCGTCGGACAGGAAGAGGCCATCACCGCCGTAGCCGATGCCATCCGGAGAAGCCGTGCAGGATTGCAGGACCCTCGCCGCCCTATTGGATCATTTATCTTTCTCGGTACTACCGGTGTGGGTAAAACGGAGTTGGCAAAAGCGCTGGCTGAATACCTCTTCGATGATGAAGGCATGATGACCCGCATCGATATGAGCGAATACCAGGAGAAACATACGGTCAGCAGACTGGTGGGCGCGCCTCCCGGATACGTGGGATATGACGAAGGCGGTCAGTTGACAGAAGCCGTACGCCGTAAACCCTATAGCGTGATCCTGTTGGATGAGATCGAAAAAGCCCATCCGGACGTTTTCAACGTCCTGCTGCAGGTACTGGACGACGGCAGGCTCACCGATAACAAAGGCAGGGTGGTGAACTTCAAGAACACCATCATCATTATGACCAGCAATATGGGCAGCCAGATCATCCAGGCGAACTTCGAGGACGTGACGGAGAAGAACAGGGAAGATGTAATGGAGAAGACGAAGGTCGAAGTAACCAATCTGCTGAGACAGACCATCCGGCCGGAATTCCTCAACCGGATCGATGAGATCATCCTGTTCCAGCCACTCCTCAAGAGCGAGATCAGGGGCATCATCCGCATACAGCTGGACGGCCTCCAGAAAATGGTAGCCAAAAATGGCATCAACCTGGAGTTCAGCGACTATGCATTGGATTACCTGGCCGAAAACGGTTTCGATCCGCAGTTCGGCGCCCGGCCACTGAAGAGGCTCATCCAAAAGGAGATAGTTAATAAGTTGAGTAAGAAAATATTAGCAGGTGACGTGGATAAGACACACCCCGTCCTGGTGGACGTATTCGATGGGGTAGTGGTCTTTCGTAACGAGACCCATCAAACGCACGAAGTATAA
PROTEIN sequence
Length: 873
MNLNNFTIKAQEAIAKSQQLAFDKGNPVIETEHLLKSLLSEEDSLVEFLLKKNNVNVNFVEGKLDESINKLPKTNGGEPAQTISRDMNNVMLRAGSDLKQFGDEFVSVEHILLAVLQGNDNASKLLKDAGLTEKGLVAAIRDLRKGSTVNSQTQETSFNALNKYAKNLNELARQGKLDPVIGRDEEIRRTLHILSRRSKNNPILVGEPGVGKTAIAEGLAHRIVNGDVPENLRSKVIYALDMGQLIAGAKYKGEFEERLKSVVKEVSGSDGEIILFIDEIHTLVGAGGGEGAMDAANILKPALARGELRAIGATTLNEYQKFFEKDKALERRFQKVLIDEPNVEDAISILRGLKDRYETHHHVRIKDEAIIAAVELSHRYVTDRFLPDKAIDLVDESAAKLRLEMNSMPEELDRLERQIRQLEIEREAIKRENDKEKLKELSAEIGNLSVSRDTLRAKWKQEKELVEKVQNAKAEIENLKLAAEKAEREGQYGLVAEIRYGKVKEQEKIIDEYSRELATISATSRLMKEEVDAEDIAEAVAKATGIPVAKMLQSEREKLLNLEDELHKRVVGQEEAITAVADAIRRSRAGLQDPRRPIGSFIFLGTTGVGKTELAKALAEYLFDDEGMMTRIDMSEYQEKHTVSRLVGAPPGYVGYDEGGQLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRLTDNKGRVVNFKNTIIIMTSNMGSQIIQANFEDVTEKNREDVMEKTKVEVTNLLRQTIRPEFLNRIDEIILFQPLLKSEIRGIIRIQLDGLQKMVAKNGINLEFSDYALDYLAENGFDPQFGARPLKRLIQKEIVNKLSKKILAGDVDKTHPVLVDVFDGVVVFRNETHQTHEV*