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berkeley_reactor_200306_biofilm_scaffold_155139_5

Organism: 2019_SCN_bioreactor_200211_biofilm_Sphingobacteriia_51_13

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(2747..4201)

Top 3 Functional Annotations

Value Algorithm Source
RagB/SusD domain-containing protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EWZ0_EMTOG similarity UNIREF
DB: UNIREF100
  • Identity: 54.2
  • Coverage: 485.0
  • Bit_score: 488
  • Evalue 4.40e-135
RagB/SusD domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 54.2
  • Coverage: 485.0
  • Bit_score: 488
  • Evalue 1.20e-135
RagB/SusD domain-containing protein {ECO:0000313|EMBL:AFK04193.1}; Flags: Precursor;; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.2
  • Coverage: 485.0
  • Bit_score: 488
  • Evalue 6.10e-135

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Taxonomy

Emticicia oligotrophica → Emticicia → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1455
ATGAGAACGATGAAAAAATCAATATATCAATTAGTGTTTGCAGGTCTGCTGTTGTCGATCATTTCCTGCAGCAAGTCCAGATTGAATCCCACATCCACCACTGCTGTCCCTTACGAAGCCAAATTTGCCACTGCGGACCGTATCGCCAACCTGGTAAATGGCCTGTACAGCTCTCTGAAGAGTGGTAATCTGCTGGGGGGACGCTACCAGATCTACAATGATGTCAGGGGTGAGAACTTCCTGAACAGAACGAACAATGGTGTGACGGCCCTGTTGATCTGGAATTTTTCCGTCACAGGCTCCGATGCAGAGATCAACAACACCTGGAATGCCGCCTATTCGGCCATCAACAATGCCAATATATTCCTCGATGGCATGCAAAAGGATGGCAATGCGGTAGTTGGCGACGACCTGGCCAAACAATATAATGGAGAGGCCAAGTTTGTGCGGGCGCTGGCTTATTATTCCCTGCTTCAATTGTATGCCCAGCCTTATACAAAGGACAACGGCGCTTCCCCGGGATTGCCTTTGCGTCTGACCCCCATCATCTCATCCGGCTTCAATGACCTGGCCAGAAGTTCTGTGTCGGACGTCTATAAGCAGATCATCAGTGATCTGAACGATGCAGAAACAGGTCTGCCTGCAAAATACGGCGATGCTGAAACCAATACCACGCATGCACACAGGAATACTGCCATTGCTCTAAAGACCCGTGTATACCTGAGCATGGGAGACTGGGATCATGTGATCACCGAGGGTAACAAGATCGTTCCTGCTGCGGCGCCTTTCAAGGCCCCAACGGGTGTGCCTTTTGCATTGCAGGCTGATGTGACGACGGTGTTTGCCAATTACAGCACCACCGAATCTATCCTGTCTATGCCTTTCACCGGGGCTAACGAAGCGCCCGGCACGCAGAACCAGCTGGCTTATTACTACCTGCCCGCGGCCCTGGGCGGCAACGGTGAGTTCTACCTGAACCTGAAAGGTGTTGTTATCGATCCTTCCTGGAAGCAGTCGGATGCACGTCGCGCCTTTATCACGGACAGCGTTTCCGGAAGGCTCTATCTGCAGAAATATCCCGGTGGTTCGCCTTATATCGACTGGGCGCCCGTGATGCGTTACCCGGAGGTGCTGCTGTCGCTGGCAGAAGCCCGCGTCAAATCCACCAATACAGTGGATGCGCAGGCCATTGCGTTATTAAACGCGGTGCGTGAGCGTTCTGATCCTACCACGACCTTTACGGCTGGTGATTTTGCCGCGCCCTCCGATCTGGCTGATGCCATTATCAGGGAACGGAACATTGAGTTCCTGGGTGAAGGTATCCGGGGACTGGATATCTCCCGCCTGGGCCTGAGCTTTCCTGCCAAAGGGTCTGTAAAGGCGGTACCGCCTTCGGATCCGGCTTATATATTTCCCGCACCTACTGCAGAGACGCAGTACAATCATCTCTGGTAA
PROTEIN sequence
Length: 485
MRTMKKSIYQLVFAGLLLSIISCSKSRLNPTSTTAVPYEAKFATADRIANLVNGLYSSLKSGNLLGGRYQIYNDVRGENFLNRTNNGVTALLIWNFSVTGSDAEINNTWNAAYSAINNANIFLDGMQKDGNAVVGDDLAKQYNGEAKFVRALAYYSLLQLYAQPYTKDNGASPGLPLRLTPIISSGFNDLARSSVSDVYKQIISDLNDAETGLPAKYGDAETNTTHAHRNTAIALKTRVYLSMGDWDHVITEGNKIVPAAAPFKAPTGVPFALQADVTTVFANYSTTESILSMPFTGANEAPGTQNQLAYYYLPAALGGNGEFYLNLKGVVIDPSWKQSDARRAFITDSVSGRLYLQKYPGGSPYIDWAPVMRYPEVLLSLAEARVKSTNTVDAQAIALLNAVRERSDPTTTFTAGDFAAPSDLADAIIRERNIEFLGEGIRGLDISRLGLSFPAKGSVKAVPPSDPAYIFPAPTAETQYNHLW*