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berkeley_reactor_200306_biofilm_scaffold_159982_10

Organism: 2019_SCN_bioreactor_200211_biofilm_Sphingobacteriia_51_13

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 8465..11389

Top 3 Functional Annotations

Value Algorithm Source
Glycine dehydrogenase (decarboxylating) {ECO:0000256|HAMAP-Rule:MF_00711}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00711};; Glycine cleavage system P-protein {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine decarboxylase {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|HAMAP-Rule:MF_00711}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.3
  • Coverage: 980.0
  • Bit_score: 1423
  • Evalue 0.0
glycine dehydrogenase n=1 Tax=Segetibacter koreensis RepID=UPI00037A8B13 similarity UNIREF
DB: UNIREF100
  • Identity: 73.0
  • Coverage: 973.0
  • Bit_score: 1435
  • Evalue 0.0
Glycine dehydrogenase (decarboxylating) similarity KEGG
DB: KEGG
  • Identity: 72.3
  • Coverage: 980.0
  • Bit_score: 1423
  • Evalue 0.0

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2925
ATGAATCTATTTGAAAAACAGGCTAGTGAGTTCCTCGGTCGGCATATCGGTCCCAATGAAGAAGAGACAGCGAAAATGCTGAAAACCATTGGTGTAGGCTCTCTGAATGAACTGATAGACAAGACCATCCCCGCCTCGATCCGCAGCCAGGAGGCCCTGGCGCTTCCCGGACCCATCAGCGAACATCAGTACCTGACGGAGCTGAAGCAGGTAGCGGCGCGCAACAAGGTCAACAAATCTTACATTGGTCAGGGTTACTACGATGTGATCGTGCCCAGTGTGATCCTGCGCAATGTCTTTGAGAACCCAGGCTGGTATACGCAGTATACGCCTTACCAGGCTGAGATTTCCCAGGGGCGCCTGGAGAGCCTGCTGAACTTCCAGACCATGGTGGCCGACCTTACCGGTCTGCCGCTGGCGAATGCTTCCCTGCTGGATGAGGGCACGGCGGCTGCGGAAGCCATGACCATGTTCTTCAACCTGAAAAACAGGGATCATGACCATATCACTACTCCTAAATTTTTTGTAGACAGCAATATATTCGCCCAGACCAAGGATATCCTTCTGACCAGGTCGCAGCCGGTGGGCATCGAGCTGGTGGAAGGCGATTATCGCCGTGTAAAGATCGATGCCTCCTATTTTGGGGCTATCGTGCAATATCCTGCCGGTGATGGTGCGGTGGAGGATCACCGTCAGTTCATCCAGCAGGTGCATGCAGCGGGCGGCTATGTAGTCATGGCCACCGATCTGCTGGCGCTGACCCTACTGACCCCTCCCGGTGAGCTGGGCGCGGACGTAGCCGTGGGCAGCGCGCAGCGTTTTGGCGTTCCCATGGGCTTTGGAGGTCCTCATGCGGCCTTTTTTGCCGCCAAGGACGATTTCAAAAGAAGCATTCCCGGACGTATCATCGGTGTAAGCATCGATGCCCAGGGCAATCGTGCATTGCGCATGGCCCTGCAGACCCGGGAACAACATATCAAACGGGAAAAGGCTACCTCCAACATCTGTACCGCGCAGGCCCTGCTGGCCAATATGGCGGCCATGTACGCAGTGTTTCATGGTCCCGCAGGTCTGACAGATATCGCCAAGCGGGTGAGCCTGCTGGCTCGTACACTTTCCCATGAACTGAACACGCTGGGCTTCGAGAATATCAATGAAGCTTATTTCGACACGATAAAGATCAAGGTTGCGGACGCGGACGCCATCCGTGGTGCGGCGGAACTAAGGGGCATCAACTTCCGGTACTATGACGGACATATCGGCATCAGCCTGGATGAGACTACCACCCAGCAGGATGTGCTGAATATCCTCAGCGTATTCCAGTCCATCAAGGGAAGTGATGTAGCCATCGCCACCTTCGATGTGGAAGATGACACGCTGGATAATATCCCTTCCCCGCTGACCCGTGTTTCCGAATTCCTTACACATCCCGTATTCAATACGCACCATAGCGAGTCCGAGATGATGCGGTATCTGAAGAGCCTGGAGAACAAGGACCTTTCCCTGAATACCTCCATGATCTCCCTGGGTTCCTGCACTATGAAGCTGAATGCCGCTTCGGAGCTTATTCCTGTCAGCTGGCCCGAGTTTGGCGGTCTGCATCCTTTTGCACCTGCCGATCAATGGAAGGGCTACCGGCAGATCATTACCGAGCTGGAACATGCATTGAGCGTGATCACCGGTTTTGCCGCTACTTCTCTGCAACCCAATAGCGGTGCGCAGGGCGAGTATGCCGGGCTTTTAACCATCCGTGCCTATCACGCAGCCAATAACGGTGCTCACCGTGATGTCATGCTGATACCGATCTCAGCCCACGGAACCAACCCTGCCAGCGCAGTGATGGCGGGAATGAAGGTCGTGGTGGTAAAGAGCGACGAAGACGGCCATATCGATGTGGCCGATCTGAAGGCGAAGGCCGTCCAATATAAGGACCATCTCGCCGGCCTGATGGTGACCTATCCTTCTACGCACGGTGTATTCGAAGAGAGCATAAAAGATATTTGCCAGGCCATTCATGACAATGGAGGGCTGGTATATATGGATGGCGCCAATATGAATGCCCAGGTAGGACTTACCAGCCCCGGCCTGATCGGAGCGGACGTATGTCACCTGAACCTTCACAAGACCTTCGCTATTCCTCACGGCGGCGGCGGTCCCGGGATGGGCCCCATCTGTGTGAATGAAAAGCTGAAGCCTTACCTGCCCGGGCACGTGGCGCTGGAAGCAGCAGCAGCGGCGGCTCATGCATCCTCCAATGGACATGGGATGCATGGTACAAAGGTGCATGCGGTCTCAGCGGCGCCGTACGGCTCGGCGAGCATTCTGCTGATCAGCTATGCCTATATCAAAATGCTGGGTGCAGAAGGACTTACCCGCAGCACGAAATATGCCATCCTGAACGCCAACTACATGAAGGCCAGACTGGAGAAACATTATAAGATCCTCTACAGCGGCAGTAACGGCACCTGTGCACACGAGTTTATCGTGGATCTGCGGCCATTCAAGGCCAGCGCCGGGGTCGAGGCGGAAGACGTGGCCAAGCGACTGATGGATTATGGCTTCCACGCTCCCACCCTTAGCTTCCCTGTACCGGGCACGATCATGGTCGAGCCTACGGAAAGTGAGGATAAGGCGGAACTGGATCGATTCTGCAATGCACTGATCAGTATCCATGACGAGATCGTGCGTATCGAAGAAGGTCAGGCAGATAAAGCAGACAATGCCCTGAAAAATGCGCCGCATACGCAGCATGTGATTTGTGCCGACGAGTGGAACCATGTTTATAGCCGCAGCCAGGCAGCTTTCCCGCTGCCTTATGTGAAGGAGAATAAGTTCTGGCCGAGTGTCGGGCGTGTCAACAACACGCATGGCGACAGGAATCTTATTTGTACCTGCGAGCCGGTGAGCTCATATGAAGTAGCATAA
PROTEIN sequence
Length: 975
MNLFEKQASEFLGRHIGPNEEETAKMLKTIGVGSLNELIDKTIPASIRSQEALALPGPISEHQYLTELKQVAARNKVNKSYIGQGYYDVIVPSVILRNVFENPGWYTQYTPYQAEISQGRLESLLNFQTMVADLTGLPLANASLLDEGTAAAEAMTMFFNLKNRDHDHITTPKFFVDSNIFAQTKDILLTRSQPVGIELVEGDYRRVKIDASYFGAIVQYPAGDGAVEDHRQFIQQVHAAGGYVVMATDLLALTLLTPPGELGADVAVGSAQRFGVPMGFGGPHAAFFAAKDDFKRSIPGRIIGVSIDAQGNRALRMALQTREQHIKREKATSNICTAQALLANMAAMYAVFHGPAGLTDIAKRVSLLARTLSHELNTLGFENINEAYFDTIKIKVADADAIRGAAELRGINFRYYDGHIGISLDETTTQQDVLNILSVFQSIKGSDVAIATFDVEDDTLDNIPSPLTRVSEFLTHPVFNTHHSESEMMRYLKSLENKDLSLNTSMISLGSCTMKLNAASELIPVSWPEFGGLHPFAPADQWKGYRQIITELEHALSVITGFAATSLQPNSGAQGEYAGLLTIRAYHAANNGAHRDVMLIPISAHGTNPASAVMAGMKVVVVKSDEDGHIDVADLKAKAVQYKDHLAGLMVTYPSTHGVFEESIKDICQAIHDNGGLVYMDGANMNAQVGLTSPGLIGADVCHLNLHKTFAIPHGGGGPGMGPICVNEKLKPYLPGHVALEAAAAAAHASSNGHGMHGTKVHAVSAAPYGSASILLISYAYIKMLGAEGLTRSTKYAILNANYMKARLEKHYKILYSGSNGTCAHEFIVDLRPFKASAGVEAEDVAKRLMDYGFHAPTLSFPVPGTIMVEPTESEDKAELDRFCNALISIHDEIVRIEEGQADKADNALKNAPHTQHVICADEWNHVYSRSQAAFPLPYVKENKFWPSVGRVNNTHGDRNLICTCEPVSSYEVA*