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berkeley_reactor_200306_biofilm_scaffold_159982_23

Organism: 2019_SCN_bioreactor_200211_biofilm_Sphingobacteriia_51_13

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 27989..30736

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003635D52 similarity UNIREF
DB: UNIREF100
  • Identity: 64.3
  • Coverage: 902.0
  • Bit_score: 1234
  • Evalue 0.0
alpha-L-rhamnosidase similarity KEGG
DB: KEGG
  • Identity: 63.0
  • Coverage: 882.0
  • Bit_score: 1188
  • Evalue 0.0
Alpha-L-rhamnosidase {ECO:0000313|EMBL:AEV98867.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.0
  • Coverage: 882.0
  • Bit_score: 1188
  • Evalue 0.0

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2748
ATGATAAAATTTGCTTGCAGCCTGGCGGCTTTACTGCTAATCAACATCGTTTCTATTGCGCAATTGAAGGTCGGTCACCTGTCGACCGAACATCTTACCAATCCCATCGGCCTGGACATACGACAGCCACGATTCAGCTGGCAGCTGGATGCATCCGACAGAGGTATATTGCAGACTGCCTATGAGATAAAGGTCAGCATGCAGTCCGGTGGAAAGGAAGAAGTATGGAGTTCCGGAAAGATCAGCGGAGATCAATCCGTATGGGTGCCTTATGGAGGCGCCTCCTTACGTTCCGGCACCCGCTACTACTGGCGGGTACGGGTATGGGATAATAAGGGCAGAACCTCCGGCTGGAGCGCGCCTGCCTGGTGGCAGACGGGTTTGTTCGATCCCCAAAAGGAATTTACCGCGCAATGGATCGGTCCTGGTTTTGAAGAGGCGGCTACCCGGCCCAGCCCCCTGTTCAGAAAAGAGTTTGCGACCCGCAAAGGGATAAAGGCGGCCACCCTTTATATTACCTCACATGGGCTTTATGAAGCGCAGCTGAACGGCGCCGCCATCGGCGATGGCTGTCTGCAGCCTGGATGGACCTCCTATAACAAACGTCTGCAGTACCAGGTATACGATGTCACTACCCTGCTGCACAATGGCCAAAACGCGTTGGGCGTAACACTGGCCAACGGTTGGTATCGGGGCTTTATCGGATTTGGTCATCAAAAAGATTTTTATGGGAAAGATATTTCCTTGCTGCTGCAGCTGGAGGTCCAGTACCAGGACGGCAGGAAGGAGACCATCGTTTCCGATGGGAGCTGGCGCTCTTCCACCGGTGAGACCAGGAGCGCAGAGATCTATCACGGCGAGGCCATCGACAGAAGGGAAGAAAAGAAAGGATGGGGCCTGCCGGGTTATGATGACAAGGGATGGAGCGAAGTGAAAGTAGCGTCCTTTCCCATGAACAACCTGGTGGCGACCTATAACGAGCCCGTGAAGAAACAGGATATCTTTCGTCCGCAACGTGTATTCAAGAGCCCTTCAGGGGAGCAGCTTGTTGACTTCGGGCAAAATCTTGTGGGCCATGTGGTGATGAAAGCCAGCGGTGCGGCCGGTACGCGCATCGTGGTTTCGCATGCCGAGGTATTGGACAAAGCCGGTAATTTTTATACCGAGAACCTGCGCAGCGCGAAGGCCAGCGATACCTTTATTTTAAAAGGGGATGGAGAGGAGCGGTTCGAACCCCGTTTTACTTTTCATGGGTTCAGGTATATACGCATCGACGGATATCCCGGGCAGCTGCATGCAGACGATCTGCAGGCGGTGGCGTTGTTCTCCGATATGCCCAGAACGGGAGATTTTCATTGCTCGAACGCGCTGATCAACCAGCTGCAGCATAATATCCAATGGGGACAGCGGGGTAATTTCCTGGATGTCCCAACGGACTGTCCTCAGCGGGACGAACGGCTGGGATGGACGGGGGATGCGCAGGTCTTTTCCCGTACGGCCGCCTATAATATGGGGGTGGATAACTTTTTCTCCAAATGGCTGAAGGATATAGCGGCGGATCAGACTGCTTCCGGAGCGGTGCCATTTGTCATTCCCAATGTGCTGGGTAAAAATGATGCAGGTTCTACAGGATGGTCTGATGTGGCAACCATCATACCATGGAACCTTTACCTGGCGTATGGAGACCGCCGGGTGTTGGAAGACCAGTATGCCAGCATGAAGGCGTGGGTGGAGTACATGCATACGCAAAGCAAAAATGATCTCTGGAACACGGGATTTCATTTTGGGGACTGGCTATTCTACAGACCGGAAGACGACGATGACGGGCGTTCGGCTGTCACGGATAAATATCTCATCGCGCAATGTTTTTATGCGCATAGTACCCAGCTGTTGATCGACGCCGCGAGGGTACTTGATAAGAAAGAGGATGTAGCTGCCTATGAGCAGCTGCTGAAAAAGATCAAGGCTGCTTTTGCCAGGGAATATGTGACAGCCACCGGCCGATTGGTTTCCGGTACACAGACCGCGTATGTGCTGGCGCTGCAGTTCGATATGCTGCCCGAGGCGCTGCAGACGCAGGCGGCCAGGCGATTGGCGGATAATGTAAAGGATTACGGATATCATCTGACGACGGGCTTCCTCGGAACCCCTTATCTCTGTCATGTACTCAGCCGCTGGGGCTATACGGATATCGCTTACCGGCTGCTGATGCAGGAGACCTATCCTTCCTGGCTGTACCCTGTGAAGATGGGTGCCACTACCATTTGGGAACGTTGGGATGGGATCAGGCCTGACAGCAGTTTTGAAAATGCGAGTATGAACTCATTTAACCACTATTCATACGGGGCTATCGGGGATTGGATGTACCGGGTCGTGGCGGGACTGGATACCTATGAAGATGGCGTGGGTTATAAGCACAGCATGATCTACCCCCATCCGGGAGGGGGATTAAAAGAGGTCCAGGCGCGGTTGATGACGAGCTATGGAGAGCTGGCTTCGCACTGGCATGCGGAAAAGGATTCTTTTATGCTGGATGTTGTCATTCCGGCTAATACGCATTCGACCGTTTATATACCGGCTCCTGAGGGCGGGCAGGTTACGGAGAGCGGTGTTCTCCTGGGAAAAGTGAAGGATATCAAAGTGGCTGGTGTGGGCAGAGGGTTTTTGATGGTGGACCTGGGATCGGGCAGCTATCATTTTGCCGTGAAGGAGGATGTGGAGGCGATGAAGACGGAAAGAGGGCAATAA
PROTEIN sequence
Length: 916
MIKFACSLAALLLINIVSIAQLKVGHLSTEHLTNPIGLDIRQPRFSWQLDASDRGILQTAYEIKVSMQSGGKEEVWSSGKISGDQSVWVPYGGASLRSGTRYYWRVRVWDNKGRTSGWSAPAWWQTGLFDPQKEFTAQWIGPGFEEAATRPSPLFRKEFATRKGIKAATLYITSHGLYEAQLNGAAIGDGCLQPGWTSYNKRLQYQVYDVTTLLHNGQNALGVTLANGWYRGFIGFGHQKDFYGKDISLLLQLEVQYQDGRKETIVSDGSWRSSTGETRSAEIYHGEAIDRREEKKGWGLPGYDDKGWSEVKVASFPMNNLVATYNEPVKKQDIFRPQRVFKSPSGEQLVDFGQNLVGHVVMKASGAAGTRIVVSHAEVLDKAGNFYTENLRSAKASDTFILKGDGEERFEPRFTFHGFRYIRIDGYPGQLHADDLQAVALFSDMPRTGDFHCSNALINQLQHNIQWGQRGNFLDVPTDCPQRDERLGWTGDAQVFSRTAAYNMGVDNFFSKWLKDIAADQTASGAVPFVIPNVLGKNDAGSTGWSDVATIIPWNLYLAYGDRRVLEDQYASMKAWVEYMHTQSKNDLWNTGFHFGDWLFYRPEDDDDGRSAVTDKYLIAQCFYAHSTQLLIDAARVLDKKEDVAAYEQLLKKIKAAFAREYVTATGRLVSGTQTAYVLALQFDMLPEALQTQAARRLADNVKDYGYHLTTGFLGTPYLCHVLSRWGYTDIAYRLLMQETYPSWLYPVKMGATTIWERWDGIRPDSSFENASMNSFNHYSYGAIGDWMYRVVAGLDTYEDGVGYKHSMIYPHPGGGLKEVQARLMTSYGELASHWHAEKDSFMLDVVIPANTHSTVYIPAPEGGQVTESGVLLGKVKDIKVAGVGRGFLMVDLGSGSYHFAVKEDVEAMKTERGQ*